Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 4
- nucleus 2
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P13640_001 | Banana | cytosol | 51.13 | 76.35 |
| PGSC0003DMT400018250 | Potato | cytosol | 49.77 | 74.32 |
| Solyc07g062060.2.1 | Tomato | plastid | 48.87 | 72.97 |
| KRH44863 | Soybean | plastid | 55.2 | 60.4 |
| Zm00001d037273_P001 | Maize | plastid | 56.56 | 59.81 |
| Os06t0472000-01 | Rice | plastid | 56.11 | 58.49 |
| TraesCS7B01G247500.2 | Wheat | plastid | 52.04 | 58.38 |
| TraesCS7D01G343600.2 | Wheat | plastid | 51.58 | 57.87 |
| VIT_19s0014g00170.t01 | Wine grape | plastid | 51.13 | 57.07 |
| AT1G53670.1 | Thale cress | plastid | 48.87 | 53.47 |
| Bra039683.1-P | Field mustard | plastid | 49.32 | 53.43 |
| CDY24080 | Canola | plastid | 49.32 | 53.43 |
| CDY45127 | Canola | plastid | 49.32 | 53.43 |
| HORVU7Hr1G082710.2 | Barley | plastid | 51.58 | 49.35 |
| EER94826 | Sorghum | cytosol | 25.79 | 42.54 |
| EES18201 | Sorghum | mitochondrion | 29.86 | 30.28 |
Protein Annotations
| Gene3D:2.170.150.20 | MapMan:35.1 | EntrezGene:8061494 | UniProt:C5Z7K5 | EnsemblPlants:EER88155 | ProteinID:EER88155 |
| ProteinID:EER88155.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009987 | GO:GO:0016671 | GO:GO:0019538 | GO:GO:0030091 |
| GO:GO:0033743 | GO:GO:0055114 | InterPro:IPR002579 | HAMAP:MF_01400 | InterPro:Met_Sox_Rdtase | InterPro:Met_Sox_Rdtase_MsrB |
| InterPro:Mss4-like_sf | PFAM:PF01641 | PFscan:PS51790 | PANTHER:PTHR10173 | PANTHER:PTHR10173:SF37 | EnsemblPlantsGene:SORBI_3010G101000 |
| SUPFAM:SSF51316 | unigene:Sbi.10952 | TIGRFAMs:TIGR00357 | UniParc:UPI0001A8944F | RefSeq:XP_002436788.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr10:+:9301907..9305873
Molecular Weight (calculated)
23764.9 Da
IEP (calculated)
8.714
GRAVY (calculated)
-0.456
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARCYAAAS VVRAGAHDLS LSPSSFSVTA AARPRPVGGV WACGGAGGGY SWLRAVRAMG SAPSSSSSQS PSPQTPSGQT QGKADYTSLS EEEWKKRLTK
101: EQYYVTRQKG TERAFTGEYW NTKTPGIYHC VCCDTPLFES STKFDSGTGW PSYYKPIGEN VKSKLDMSII FMPRTEVLCA ACDAHLGHVF DDGPPPTGQR
201: YCINSASLKL KPQSLDPLGR S
101: EQYYVTRQKG TERAFTGEYW NTKTPGIYHC VCCDTPLFES STKFDSGTGW PSYYKPIGEN VKSKLDMSII FMPRTEVLCA ACDAHLGHVF DDGPPPTGQR
201: YCINSASLKL KPQSLDPLGR S
001: MASSTRLTII QSSFVSARTR LNYVSKTNHS GFACRSLSKP RNLSLSVYSM GSSSSSPKPD NVQEAEKNEF ASLSENEWKK RLTPEQYYIT RQKGTERAFT
101: GEYWNSKTPG VYNCVCCDTP LFDSSTKFDS GTGWPSYYQP IGNNVKTKLD LSIIFMPRQE VVCAVCNAHL GHVFDDGPRP TGKRYCLNSA ALKLNALEKT
201: RD
101: GEYWNSKTPG VYNCVCCDTP LFDSSTKFDS GTGWPSYYQP IGNNVKTKLD LSIIFMPRQE VVCAVCNAHL GHVFDDGPRP TGKRYCLNSA ALKLNALEKT
201: RD
Arabidopsis Description
MSRB1Peptide methionine sulfoxide reductase B1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C8M2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.