Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029238_P001 | Maize | cytosol | 94.03 | 93.33 |
| Os03t0360700-01 | Rice | plasma membrane, plastid | 92.54 | 91.18 |
| TraesCS6B01G362800.2 | Wheat | cytosol | 91.04 | 91.04 |
| TraesCS6A01G332000.1 | Wheat | cytosol | 90.3 | 90.3 |
| TraesCS6D01G311300.1 | Wheat | cytosol | 90.3 | 90.3 |
| HORVU6Hr1G080500.1 | Barley | plastid | 88.81 | 63.3 |
| EES18201 | Sorghum | mitochondrion | 75.37 | 46.33 |
| EER88155 | Sorghum | plastid | 42.54 | 25.79 |
Protein Annotations
| Gene3D:2.170.150.20 | MapMan:35.1 | EntrezGene:8080799 | UniProt:C5WZL1 | EnsemblPlants:EER94826 | ProteinID:EER94826 |
| ProteinID:EER94826.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016671 | GO:GO:0019538 | GO:GO:0030091 | GO:GO:0033743 |
| GO:GO:0055114 | InterPro:IPR002579 | InterPro:Met_Sox_Rdtase | InterPro:Met_Sox_Rdtase_MsrB | InterPro:Mss4-like_sf | PFAM:PF01641 |
| PFscan:PS51790 | PANTHER:PTHR10173 | PANTHER:PTHR10173:SF46 | EnsemblPlantsGene:SORBI_3001G364500 | SUPFAM:SSF51316 | unigene:Sbi.19913 |
| TIGRFAMs:TIGR00357 | UniParc:UPI0001A833DC | RefSeq:XP_002467828.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:65345268..65347825
Molecular Weight (calculated)
14588.9 Da
IEP (calculated)
7.304
GRAVY (calculated)
-0.678
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGDNSKQR SEEEWRAVLS PEQFRIIRQK GTELPGTGEY NKFYGDGVYN CAGCGTPLYK STTKFDSGCG WPAFFEGLPG AINRTPDPDG RRTEITCAAC
101: GGHLGHVFKG EGFKTPTDER HCVNSVSIKF SPSS
101: GGHLGHVFKG EGFKTPTDER HCVNSVSIKF SPSS
001: MAFNIITPGR VYSATSLTFV STIKAAFVKP PLASPSRRNL LRFSSSPLSF PSLRRGFHGG RIVAMGSSAP ESVNKPEEEW RAILSPEQFR ILRQKGTEYP
101: GTGEYNKVFD DGIYCCAGCG TPLYKSTTKF DSGCGWPAFF DGLPGAITRT PDPDGRRIEI TCAACGGHLG HVFKGEGFPT PTDERHCVNS ISLKFTPENP
201: TL
101: GTGEYNKVFD DGIYCCAGCG TPLYKSTTKF DSGCGWPAFF DGLPGAITRT PDPDGRRIEI TCAACGGHLG HVFKGEGFPT PTDERHCVNS ISLKFTPENP
201: TL
Arabidopsis Description
MSRB2Peptide methionine sulfoxide reductase B2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5C8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.