Factsheet for Os03t0360700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G362800.2	Wheat	cytosol	91.91	93.28
EER94826	Sorghum	cytosol	91.18	92.54
TraesCS6A01G332000.1	Wheat	cytosol	91.18	92.54
TraesCS6D01G311300.1	Wheat	cytosol	91.18	92.54
Zm00001d029238_P001	Maize	cytosol	91.18	91.85
HORVU6Hr1G080500.1	Barley	plastid	89.71	64.89
Os05t0404200-01	Rice	plasma membrane	79.41	47.16
Os06t0472000-01	Rice	plastid	41.91	26.89

Protein Annotations

Gene3D:2.170.150.20	MapMan:35.1	EntrezGene:4332888	ProteinID:ABF96078.1	EMBL:AK068764	EMBL:AK109429
EMBL:AY224463	ProteinID:BAF12070.1	ProteinID:BAS84283.1	ProteinID:EAZ26998.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0016671	GO:GO:0019538	GO:GO:0030091	GO:GO:0033743	GO:GO:0046872	GO:GO:0055114
InterPro:IPR002579	InterPro:Met_Sox_Rdtase	InterPro:Met_Sox_Rdtase_MsrB	InterPro:Mss4-like_sf	EnsemblPlantsGene:Os03g0360700	EnsemblPlants:Os03t0360700-01
PFAM:PF01641	PFscan:PS51790	PANTHER:PTHR10173	PANTHER:PTHR10173:SF46	UniProt:Q10L32	SUPFAM:SSF51316
TIGRFAMs:TIGR00357	UniParc:UPI0000DB4650	RefSeq:XP_015633089.1	:	:	:

Description

peptide methionine sulfoxidereductase 1, Methionine sulfoxide reductase B5Similar to Protein-methionine-S-oxide reductase, PilB family. (Os03t0360700-01)

Coordinates

chr3:+:14010213..14013827

Molecular Weight (calculated)

14673.1 Da

IEP (calculated)

7.304

GRAVY (calculated)

-0.552

Length

136 amino acids

Sequence
(BLAST)

001: MASSGDSSGK QRSDEEWRAV LSPEQFRILR LKGTELPGTG EYNKFYGDGV YNCAGCGTPL YKSTTKFDSG CGWPAFFEGL PGAINRTPDP DGRRVEITCA
101: ACGGHLGHVF KGEGFKTPTD ERHCVNSVSI KFTPAS

Best Arabidopsis Sequence Match ( AT4G21860.3 )
(BLAST)

001: MAFNIITPGR VYSATSLTFV STIKAAFVKP PLASPSRRNL LRFSSSPLSF PSLRRGFHGG RIVAMGSSAP ESVNKPEEEW RAILSPEQFR ILRQKGTEYP
101: GTGEYNKVFD DGIYCCAGCG TPLYKSTTKF DSGCGWPAFF DGLPGAITRT PDPDGRRIEI TCAACGGHLG HVFKGEGFPT PTDERHCVNS ISLKFTPENP
201: TL

Arabidopsis Description

MSRB2Peptide methionine sulfoxide reductase B2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5C8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.