Factsheet for HORVU6Hr1G080500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G362800.2	Wheat	cytosol	65.96	92.54
TraesCS6D01G311300.1	Wheat	cytosol	65.43	91.79
TraesCS6A01G332000.1	Wheat	cytosol	64.36	90.3
Os03t0360700-01	Rice	plasma membrane, plastid	64.89	89.71
EER94826	Sorghum	cytosol	63.3	88.81
Zm00001d029238_P001	Maize	cytosol	63.3	88.15
HORVU7Hr1G082710.2	Barley	plastid	29.26	23.81

Protein Annotations

Gene3D:2.170.150.20	MapMan:35.1	UniProt:A0A287UWA4	GO:GO:0003674	GO:GO:0003824	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016671	GO:GO:0019538
GO:GO:0030091	GO:GO:0033743	GO:GO:0055114	EnsemblPlantsGene:HORVU6Hr1G080500	EnsemblPlants:HORVU6Hr1G080500.1	InterPro:IPR002579
InterPro:Met_Sox_Rdtase	InterPro:Met_Sox_Rdtase_MsrB	InterPro:Mss4-like_sf	PFAM:PF01641	PFscan:PS51790	PANTHER:PTHR10173
PANTHER:PTHR10173:SF46	SUPFAM:SSF51316	TIGRFAMs:TIGR00357	UniParc:UPI000B4698FA	SEG:seg	:

Description

No Description!

Coordinates

chrchr6H:-:541976398..541978303

Molecular Weight (calculated)

20188.8 Da

IEP (calculated)

9.160

GRAVY (calculated)

-0.590

Length

188 amino acids

Sequence
(BLAST)

001: HPKAPKRGQS HPPRNKSPLS FLFPSSALNP PFPASLPGAP PASCCLRSPR AGERSMASGD SKPRSEEEWR AVLSPEQFRI LRLKGTELPG TGEYNKFYGG
101: GVYNCAGCGT PLYKSTTKFD SGCGWPAFFE GLPGAIHRTP DPDGRRVEIT CASCGGHLGH VFKGEGFKTP TDERHCVNSV SIKFTPAS

Best Arabidopsis Sequence Match ( AT4G21860.3 )
(BLAST)

001: MAFNIITPGR VYSATSLTFV STIKAAFVKP PLASPSRRNL LRFSSSPLSF PSLRRGFHGG RIVAMGSSAP ESVNKPEEEW RAILSPEQFR ILRQKGTEYP
101: GTGEYNKVFD DGIYCCAGCG TPLYKSTTKF DSGCGWPAFF DGLPGAITRT PDPDGRRIEI TCAACGGHLG HVFKGEGFPT PTDERHCVNS ISLKFTPENP
201: TL

Arabidopsis Description

MSRB2Peptide methionine sulfoxide reductase B2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5C8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.