Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT4G04830.1 | Thale cress | cytosol | 84.17 | 84.17 |
CDY21318 | Canola | cytosol | 82.73 | 80.99 |
CDX90878 | Canola | cytosol | 80.58 | 78.87 |
Bra000806.1-P | Field mustard | cytosol | 79.86 | 78.17 |
GSMUA_Achr8P05970_001 | Banana | cytosol | 71.22 | 72.79 |
AT4G21830.1 | Thale cress | cytosol | 66.19 | 63.89 |
AT4G21840.1 | Thale cress | cytosol | 64.75 | 62.94 |
AT4G21850.1 | Thale cress | cytosol | 61.87 | 60.14 |
AT4G04840.1 | Thale cress | cytosol | 60.43 | 54.9 |
AT4G04800.1 | Thale cress | extracellular, plasma membrane, vacuole | 69.06 | 54.55 |
Solyc01g106400.2.1 | Tomato | plastid | 64.03 | 52.05 |
VIT_00s0282g00010.t01 | Wine grape | plastid | 72.66 | 51.27 |
Solyc10g047930.1.1 | Tomato | plastid | 71.94 | 50.76 |
PGSC0003DMT400068883 | Potato | cytosol | 71.94 | 50.0 |
AT4G21860.1 | Thale cress | plastid | 71.22 | 49.01 |
PGSC0003DMT400008074 | Potato | plastid | 63.31 | 48.35 |
KRH21686 | Soybean | plastid | 69.78 | 48.02 |
KRH10659 | Soybean | plastid | 69.78 | 47.55 |
TraesCS1A01G252400.1 | Wheat | mitochondrion, plastid | 69.78 | 45.12 |
TraesCS1D01G252100.1 | Wheat | mitochondrion, plastid | 68.35 | 43.78 |
TraesCS1B01G265600.1 | Wheat | mitochondrion, plastid | 68.35 | 43.38 |
Zm00001d010336_P001 | Maize | mitochondrion | 66.91 | 42.86 |
EES18201 | Sorghum | mitochondrion | 66.91 | 42.66 |
Os05t0404200-01 | Rice | plasma membrane | 69.06 | 41.92 |
AT1G53670.1 | Thale cress | plastid | 35.97 | 24.75 |
Protein Annotations
Gene3D:2.170.150.20 | MapMan:35.1 | EntrezGene:825818 | ProteinID:AAD03449.1 | ProteinID:AEE82428.1 | ArrayExpress:AT4G04810 |
EnsemblPlantsGene:AT4G04810 | RefSeq:AT4G04810 | TAIR:AT4G04810 | RefSeq:AT4G04810-TAIR-G | EnsemblPlants:AT4G04810.1 | TAIR:AT4G04810.1 |
Symbol:ATMSRB4 | ProteinID:CAB80846.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006950 | GO:GO:0006979 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016671 | GO:GO:0019538 |
GO:GO:0030091 | GO:GO:0033743 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR002579 | InterPro:Met_Sox_Rdtase |
InterPro:Met_Sox_Rdtase_MsrB | InterPro:Mss4-like_sf | RefSeq:NP_192390.1 | PFAM:PF01641 | PO:PO:0000293 | PO:PO:0009005 |
PFscan:PS51790 | PANTHER:PTHR10173 | PANTHER:PTHR10173:SF46 | UniProt:Q9M0Z5 | SUPFAM:SSF51316 | TIGRFAMs:TIGR00357 |
UniParc:UPI00000AB22A | : | : | : | : | : |
Description
MSRB4Peptide methionine sulfoxide reductase B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0Z5]
Coordinates
chr4:+:2441241..2442785
Molecular Weight (calculated)
15333.0 Da
IEP (calculated)
5.256
GRAVY (calculated)
-0.462
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MADLVTVVKK TEEEWRAVLS PEQFRILRQK GTETPGTEEY DKFFEEGIFS CIGCKTPLYK STTKFDAGCG WPAFFEGLPG AINRAPDPDG RRTEITCAVC
101: DGHLGHVHKG EGYSTPTDER LCVNSVSINF NPAKPSSIT
101: DGHLGHVHKG EGYSTPTDER LCVNSVSINF NPAKPSSIT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.