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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • endoplasmic reticulum 1
  • golgi 1
  • extracellular 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G04830.1 Thale cress cytosol 84.17 84.17
CDY21318 Canola cytosol 82.73 80.99
CDX90878 Canola cytosol 80.58 78.87
Bra000806.1-P Field mustard cytosol 79.86 78.17
GSMUA_Achr8P05970_001 Banana cytosol 71.22 72.79
AT4G21830.1 Thale cress cytosol 66.19 63.89
AT4G21840.1 Thale cress cytosol 64.75 62.94
AT4G21850.1 Thale cress cytosol 61.87 60.14
AT4G04840.1 Thale cress cytosol 60.43 54.9
AT4G04800.1 Thale cress extracellular, plasma membrane, vacuole 69.06 54.55
Solyc01g106400.2.1 Tomato plastid 64.03 52.05
VIT_00s0282g00010.t01 Wine grape plastid 72.66 51.27
Solyc10g047930.1.1 Tomato plastid 71.94 50.76
PGSC0003DMT400068883 Potato cytosol 71.94 50.0
AT4G21860.1 Thale cress plastid 71.22 49.01
PGSC0003DMT400008074 Potato plastid 63.31 48.35
KRH21686 Soybean plastid 69.78 48.02
KRH10659 Soybean plastid 69.78 47.55
TraesCS1A01G252400.1 Wheat mitochondrion, plastid 69.78 45.12
TraesCS1D01G252100.1 Wheat mitochondrion, plastid 68.35 43.78
TraesCS1B01G265600.1 Wheat mitochondrion, plastid 68.35 43.38
Zm00001d010336_P001 Maize mitochondrion 66.91 42.86
EES18201 Sorghum mitochondrion 66.91 42.66
Os05t0404200-01 Rice plasma membrane 69.06 41.92
AT1G53670.1 Thale cress plastid 35.97 24.75
Protein Annotations
Gene3D:2.170.150.20MapMan:35.1EntrezGene:825818ProteinID:AAD03449.1ProteinID:AEE82428.1ArrayExpress:AT4G04810
EnsemblPlantsGene:AT4G04810RefSeq:AT4G04810TAIR:AT4G04810RefSeq:AT4G04810-TAIR-GEnsemblPlants:AT4G04810.1TAIR:AT4G04810.1
Symbol:ATMSRB4ProteinID:CAB80846.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0006950GO:GO:0006979
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016491GO:GO:0016671GO:GO:0019538
GO:GO:0030091GO:GO:0033743GO:GO:0046872GO:GO:0055114InterPro:IPR002579InterPro:Met_Sox_Rdtase
InterPro:Met_Sox_Rdtase_MsrBInterPro:Mss4-like_sfRefSeq:NP_192390.1PFAM:PF01641PO:PO:0000293PO:PO:0009005
PFscan:PS51790PANTHER:PTHR10173PANTHER:PTHR10173:SF46UniProt:Q9M0Z5SUPFAM:SSF51316TIGRFAMs:TIGR00357
UniParc:UPI00000AB22A:::::
Description
MSRB4Peptide methionine sulfoxide reductase B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0Z5]
Coordinates
chr4:+:2441241..2442785
Molecular Weight (calculated)
15333.0 Da
IEP (calculated)
5.256
GRAVY (calculated)
-0.462
Length
139 amino acids
Sequence
(BLAST)
001: MADLVTVVKK TEEEWRAVLS PEQFRILRQK GTETPGTEEY DKFFEEGIFS CIGCKTPLYK STTKFDAGCG WPAFFEGLPG AINRAPDPDG RRTEITCAVC
101: DGHLGHVHKG EGYSTPTDER LCVNSVSINF NPAKPSSIT
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.