Factsheet for Os09t0521300-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CAA33930
Os01t0176700-01
Os01t0551100-01
Os02t0102600-01
Os02t0135800-02
Os02t0828566-01
Os03t0379300-01
Os03t0422702-00
Os05t0271300-00
Os05t0404200-01
Os05t0530500-02
Os06t0103500-01
Os07t0615800-00
Os07t0628500-01
Os08t0494375-00
Os08t0544800-01
Os09t0521300-00
Os11t0601700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51910.1	Os01t0176700-01	AT2G03500.1	21798944
AT5G51910.1	Os02t0135800-02	AT2G30050.1	21798944
AT5G51910.1	Os07t0615800-00	AT3G16980.1	21798944
AT5G51910.1	Os01t0551100-01	AT3G20420.1	21798944
AT5G51910.1	Os05t0271300-00	AT3G20420.1	21798944
AT5G51910.1	Os05t0530500-02	AT3G29160.1	21798944
AT5G51910.1	Os03t0379300-01	AT3G47640.1	21798944
AT5G51910.1	Os07t0628500-01	AT3G47640.1	21798944
AT5G51910.1	Os08t0494375-00	AT3G47640.1	21798944
AT5G51910.1	Os11t0601700-01	AT3G47640.1	21798944
AT5G51910.1	Os05t0404200-01	AT4G04800.1	21798944
AT5G51910.1	CAA33930	AT4G11175.1	21798944
AT5G51910.1	Os06t0103500-01	AT4G16760.1	21798944
AT5G51910.1	Os02t0102600-01	AT5G07840.1	21798944
AT5G51910.1	Os02t0828566-01	AT5G08330.1	21798944
AT5G51910.1	Os03t0422702-00	AT5G08330.1	21798944
AT5G51910.1	Os08t0544800-01	AT5G51910.1	21798944
AT5G51910.1	Os09t0521300-00	AT5G51910.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G310000.1	Wheat	cytosol, nucleus, peroxisome	48.82	54.87
EER99208	Sorghum	nucleus	46.72	54.6
Zm00001d006165_P001	Maize	nucleus	46.98	54.24
TraesCS5A01G309300.1	Wheat	cytosol, nucleus, peroxisome	48.03	54.14
TraesCS5D01G316300.1	Wheat	nucleus	47.24	53.89
HORVU5Hr1G080210.1	Barley	cytosol	33.33	46.52
Os03t0422702-00	Rice	cytosol, plastid	13.91	42.06
Os04t0542302-00	Rice	cytosol, mitochondrion, nucleus	17.06	34.21
VIT_16s0022g02480.t01	Wine grape	nucleus	14.96	33.73
Os04t0194600-01	Rice	plastid	15.49	33.52
Os04t0526000-01	Rice	plastid	16.8	31.07
Os02t0635800-01	Rice	nucleus	16.54	29.86
Os02t0828566-01	Rice	nucleus	18.37	29.66
GSMUA_Achr3P12320_001	Banana	cytosol	14.7	27.72
CDY27099	Canola	nucleus	19.95	27.24
Os08t0544800-01	Rice	nucleus	26.51	27.08
CDX91612	Canola	nucleus	20.21	26.74
AT5G51910.1	Thale cress	nucleus	20.21	26.28
Bra022568.1-P	Field mustard	cytosol	20.21	25.93
KRG91429	Soybean	nucleus	21.0	24.54
VIT_15s0048g01150.t01	Wine grape	nucleus	21.78	24.48
KRH35393	Soybean	nucleus	19.95	24.44
CDX95656	Canola	nucleus	18.64	24.23
KRH48289	Soybean	nucleus	20.73	23.58
KRH65181	Soybean	nucleus	20.73	23.51
Bra000395.1-P	Field mustard	nucleus	19.16	23.47
CDY53888	Canola	nucleus	19.16	23.47
PGSC0003DMT400094424	Potato	cytosol	14.7	22.86
Os01t0924400-01	Rice	nucleus	18.9	22.71
Os06t0226700-01	Rice	nucleus	22.83	22.48
Solyc03g006800.1.1	Tomato	nucleus	19.16	22.39
Bra004929.1-P	Field mustard	nucleus	18.9	22.22
CDX74756	Canola	nucleus	18.9	22.15
PGSC0003DMT400088049	Potato	cytosol	15.49	21.85
CDY18910	Canola	nucleus	18.64	21.85
Os02t0747400-01	Rice	nucleus	23.1	21.46
KRH03994	Soybean	nucleus	18.9	21.18
PGSC0003DMT400062327	Potato	nucleus	20.21	21.04
Os11t0175700-00	Rice	nucleus, plastid	21.78	20.44
AT2G45680.1	Thale cress	cytosol	18.9	20.22
KRH57263	Soybean	nucleus	18.11	19.94
Os12t0173300-00	Rice	nucleus	20.73	18.9
Solyc08g080150.1.1	Tomato	nucleus	17.85	18.38
VIT_02s0025g04590.t01	Wine grape	nucleus	19.68	18.25
PGSC0003DMT400058534	Potato	nucleus	17.59	17.91

Protein Annotations

EntrezGene:107276766	MapMan:15.5.19	ProteinID:BAD46684.1	ProteinID:BAT09015.1	ProteinID:EEE62621.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR017887	EnsemblPlantsGene:Os09g0521300	EnsemblPlants:Os09t0521300-00	PFAM:PF03634
PFscan:PS51369	PANTHER:PTHR31072	PANTHER:PTHR31072:SF19	UniProt:Q650T3	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP
UniParc:UPI000043A5FB	RefSeq:XP_015612634.1	SEG:seg	:	:	:

Description

TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 25Similar to TCP family transcription factor. (Os09t0521300-00)

Coordinates

chr9:-:20363949..20365094

Molecular Weight (calculated)

38773.3 Da

IEP (calculated)

4.760

GRAVY (calculated)

-0.348

Length

381 amino acids

Sequence
(BLAST)

001: MASQLQGKGA ETAAAGERVA PGTNAAAFAG LGYPPIQSPV ALQEEEGPRD AAFAGYAPIR SPVVSRLQEK GEGEGEEEEV DKREEAGMAA DGSAFAAGMA
101: LVPKPEPVAV EFLRGLAVAK PPPRNRDRHV KVEGRGRRIR MPVNCAARIA QLTRELGHKS DGETIRWLMQ QSEPAIVAAT GTGTVPAIAT TVDGVLRIPT
201: ESPSAAARGD EPAPKRRRKL QPTRAAAGGP VEALAAAPPP AVYYPIVADP LLQANGGGSI SISSGLAPAS SATPPTATGG GAIPFIAMPA TSDGGKQAMS
301: PATVWMVPPG GAGAVNQPIQ YWAFQPNPDH ANFAGASSYN VGQNPGVHEA SAADHAASTG GGGGGEDDEY EGMTDSSSDE E

Best Arabidopsis Sequence Match ( AT2G45680.1 )
(BLAST)

001: MATIQKLEEV AGKDQTLRAV DLTIINGVRN VETSRPFQVN PTVSLEPKAE PVMPSFSMSL APPSSTGPPL KRASTKDRHT KVEGRGRRIR MPATCAARIF
101: QLTRELGHKS DGETIRWLLE NAEPAIIAAT GTGTVPAIAM SVNGTLKIPT TTNADSDMGE NLMKKKRKRP SNSEYIDISD AVSASSGLAP IATTTTIQPP
201: QALASSTVAQ QLLPQGMYPM WAIPSNAMIP TVGAFFLIPQ IAGPSNQPQL LAFPAAAASP SSYVAAVQQA STMARPPPLQ VVPSSGFVSV SDVSGSNLSR
301: ATSVMAPSSS SGVTTGSSSS IATTTTHTLR DFSLEIYEKQ ELHQFMSTTT ARSSNH

Arabidopsis Description

TCP9Transcription factor TCP9 [Source:UniProtKB/Swiss-Prot;Acc:O64647]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.