Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014925_P001 | Maize | mitochondrion | 87.95 | 87.95 |
| EES06098 | Sorghum | cytosol, mitochondrion | 86.75 | 87.27 |
| HORVU6Hr1G001980.1 | Barley | mitochondrion | 87.35 | 86.83 |
| TraesCS6D01G006600.1 | Wheat | cytosol | 87.35 | 86.31 |
| TraesCS2B01G597300.1 | Wheat | cytosol | 87.35 | 86.31 |
| TraesCS6B01G009600.1 | Wheat | mitochondrion | 87.35 | 85.8 |
| TraesCS6A01G004600.1 | Wheat | mitochondrion | 87.35 | 85.8 |
| VIT_02s0087g00100.t01 | Wine grape | cytosol | 74.7 | 71.26 |
| PGSC0003DMT400075540 | Potato | cytosol, mitochondrion | 61.45 | 67.11 |
| KRH76405 | Soybean | cytosol | 68.67 | 66.28 |
| KRH39707 | Soybean | cytosol | 68.67 | 66.28 |
| GSMUA_Achr9P23190_001 | Banana | cytosol | 68.67 | 66.28 |
| PGSC0003DMT400011414 | Potato | cytosol | 67.47 | 66.27 |
| Solyc08g005910.2.1 | Tomato | cytosol | 67.47 | 66.27 |
| Solyc12g096260.1.1 | Tomato | cytosol | 48.19 | 62.5 |
| CDY02163 | Canola | cytosol, mitochondrion | 61.45 | 58.29 |
| Bra012976.1-P | Field mustard | cytosol, mitochondrion | 61.45 | 58.29 |
| AT5G61230.1 | Thale cress | cytosol, plastid | 60.84 | 58.05 |
| CDY23077 | Canola | cytosol | 61.45 | 57.95 |
| AT5G07840.1 | Thale cress | cytosol | 58.43 | 55.43 |
| CDX87205 | Canola | cytosol, mitochondrion | 60.24 | 53.76 |
| CDY16818 | Canola | cytosol, mitochondrion | 60.24 | 52.91 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | EntrezGene:4327990 | EMBL:AK060523 | EMBL:AK103103 | InterPro:Ankyrin_rpt |
| InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | ProteinID:BAD07816.1 | ProteinID:BAD08199.1 | ProteinID:BAF07512.1 | ProteinID:BAS76527.1 |
| ProteinID:EAZ21399.1 | GO:GO:0000151 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0031625 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | EnsemblPlantsGene:Os02g0102600 |
| EnsemblPlants:Os02t0102600-01 | PFAM:PF13637 | PRINTS:PR01415 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR45189 |
| UniProt:Q6YU79 | SMART:SM00248 | SUPFAM:SSF48403 | UniParc:UPI00002367FF | RefSeq:XP_015627745.1 | : |
Description
Ankyrin repeat containing protein. (Os02t0102600-01)
Coordinates
chr2:+:132984..135144
Molecular Weight (calculated)
18464.8 Da
IEP (calculated)
7.712
GRAVY (calculated)
-0.746
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQFRSSLSM SRARTRHGDG DDRGWNQLHV ASRKGDLNQV RRLLDDGMDV NAPAWGPKSP GATPLHLAAQ GGHVKIMDEL LERGANIDAR TKGACGWTPL
101: HIAAKERNKR AVRFLIENGA FLPPDMNDHR FNPPLHYCSG LEWAYEMKRM QDESDSTGET SLGSES
101: HIAAKERNKR AVRFLIENGA FLPPDMNDHR FNPPLHYCSG LEWAYEMKRM QDESDSTGET SLGSES
001: MLQEPSAAFS LRRNSFRRRS PRSNVDDRGW NPLHIKARKG DLKSVKQLLD QGMDVNALAW GPKSKGVSAL HLAAEGGHIE VMDLLLERGA NIDAKTWGSC
101: GWTPLHAAAK ERKREAVKFL VENGAFLADD ITDTRFNPPV HYCHGLEWAY EEMKKLNSES SSSSGGDTSS SSDN
101: GWTPLHAAAK ERKREAVKFL VENGAFLADD ITDTRFNPPV HYCHGLEWAY EEMKKLNSES SSSSGGDTSS SSDN
Arabidopsis Description
PIA2Phytochrome-interacting ankyrin-repeat protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP4]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.