Factsheet for Os01t0530400-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0866600-01
Os01t0927900-01
Os03t0347300-01
Os03t0850400-01
Os05t0371100-00
Os07t0300900-02
Os07t0498800-01
Os07t0669800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15660.1	Os03t0347300-01	AT4G15730.1	21798944
AT3G15660.1	Os05t0371100-00	AT4G15730.1	21798944
AT3G15660.1	Os07t0669800-01	AT4G15730.1	21798944
AT3G15660.1	Os01t0866600-01	AT5G09830.1	21798944
AT3G15660.1	Os01t0927900-01	AT5G13280.1	21798944
AT3G15660.1	Os03t0850400-01	AT5G13280.1	21798944
AT3G15660.1	Os07t0300900-02	AT5G13280.1	21798944
AT3G15660.1	Os07t0498800-01	AT5G42220.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0174900-01	Rice	mitochondrion	87.03	87.03
KXG31737	Sorghum	mitochondrion	77.3	77.3
Zm00001d008736_P001	Maize	mitochondrion	69.19	76.65
TraesCS3D01G128900.1	Wheat	mitochondrion	71.89	71.89
TraesCS3A01G127900.1	Wheat	mitochondrion	70.27	68.78
TraesCS3B01G147100.1	Wheat	mitochondrion	69.73	58.64
KRH09770	Soybean	cytosol	16.76	58.49
KRH23549	Soybean	mitochondrion	49.19	56.17
VIT_09s0002g06040.t01	Wine grape	mitochondrion	50.81	55.29
CDY30094	Canola	mitochondrion	49.19	55.15
KRH44417	Soybean	cytosol, plastid	47.57	54.66
GSMUA_Achr10P...	Banana	mitochondrion	56.22	54.17
PGSC0003DMT400073383	Potato	mitochondrion	49.73	54.12
Solyc06g067960.2.1	Tomato	plastid	49.19	53.53
KRH47491	Soybean	cytosol, plastid	46.49	53.42
AT3G15660.1	Thale cress	mitochondrion	47.57	52.07
CDX97692	Canola	mitochondrion	48.11	52.05
Bra027220.1-P	Field mustard	mitochondrion	48.11	52.05
CDY20141	Canola	mitochondrion	46.49	51.5
CDY21857	Canola	mitochondrion	45.95	50.9
Bra021125.1-P	Field mustard	mitochondrion	45.95	50.9
HORVU3Hr1G023970.2	Barley	cytosol	69.19	49.42
GSMUA_Achr7P08380_001	Banana	plastid	60.54	41.18
Os03t0851200-01	Rice	nucleus, plastid	23.78	26.19
Os12t0175500-01	Rice	plastid	28.11	18.25
Os10t0500700-01	Rice	cytosol	31.89	12.02

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:4327794	UniProt:A0A1L1Z6T1	EMBL:AK103724	EMBL:AK106476
ProteinID:BAD87472.1	ProteinID:BAF05152.1	ProteinID:BAS72505.1	ProteinID:BAS72506.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0015036	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0046872	GO:GO:0051536
GO:GO:0051537	GO:GO:0055114	InterPro:GRX_PICOT-like	InterPro:Glutaredoxin	InterPro:IPR002109	EMBL:KP099431
InterPro:Monothiol_GRX-rel	EnsemblPlantsGene:Os01g0530400	EnsemblPlants:Os01t0530400-01	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10293
PANTHER:PTHR10293:SF54	UniProt:Q0JM76	SUPFAM:SSF52833	TIGRFAMs:TIGR00365	InterPro:Thioredoxin-like_sf	UniParc:UPI0000DD8B61
RefSeq:XP_015622033.1	RefSeq:XP_015622046.1	SEG:seg	:	:	:

Description

GLUTAREDOXIN 5Thioredoxin fold domain containing protein. (Os01t0530400-01);Similar to cDNA clone:002-104-C07, full insert sequence. (Os01t0530400-02);Thioredoxin fold domain containing protein. (Os01t0530400-03)

Coordinates

chr1:+:19089919..19094304

Molecular Weight (calculated)

20147.9 Da

IEP (calculated)

6.944

GRAVY (calculated)

-0.344

Length

185 amino acids

Sequence
(BLAST)

001: MARLMSSALI RGLVRSSCSP TVAAVAQPTI HQFRNYSSGL GGDSTATGDS SSTRVAADPD THQDFQPTTK SSNMSFDDIV SQDIKENPVL IYMKGYPDAP
101: RCGFSALAVR VLKQYDVPIS ARDILGDLKL KESVKAHTNW PTFPQIFIKG EFVGGSDIIL DMHQKGQLKD VLGDIAQKRE QNESS

Best Arabidopsis Sequence Match ( AT3G15660.2 )
(BLAST)

001: MAASLSSRLI KGIANLKAVR SSRLTSASVY QNGMMRFSST VPSDSDTHDD FKPTQKVPPD STDSLKDIVE NDVKDNPVMI YMKGVPESPQ CGFSSLAVRV
101: LQQYNVPISS RNILEDQELK NAVKSFSHWP TFPQIFIKGE FIGGSDIILN MHKEGELEQK LKDVSGNQD

Arabidopsis Description

GRXS15GRX4 [Source:UniProtKB/TrEMBL;Acc:A0A178VHP8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.