Factsheet for Os03t0851200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

nucleus: 19621931

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0866600-01
Os03t0769400-01
Os07t0123500-01
Os12t0596600-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54900.1	Os03t0769400-01	AT3G50780.1	21798944
AT3G54900.1	Os07t0123500-01	AT3G50780.1	21798944
AT3G54900.1	Os12t0596600-01	AT3G50780.1	21798944
AT3G54900.1	Os01t0866600-01	AT5G09830.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40339	Soybean	cytosol	8.33	82.35
TraesCS5D01G542400.1	Wheat	plastid	73.21	75.46
TraesCS5B01G545100.1	Wheat	plastid	73.21	74.55
TraesCS4A01G330300.1	Wheat	plastid	72.02	74.23
Zm00001d034857_P001	Maize	plastid	75.0	73.26
EER93091	Sorghum	plastid	74.4	72.67
Zm00001d012845_P001	Maize	plastid	74.4	72.67
CDX73434	Canola	cytosol	33.33	71.79
HORVU5Hr1G122340.1	Barley	plastid	75.6	65.13
GSMUA_Achr6P15060_001	Banana	plastid	61.31	59.2
CDX78278	Canola	plastid	56.55	54.91
Solyc02g082200.2.1	Tomato	plastid	57.14	54.55
Bra007110.1-P	Field mustard	plastid	55.95	54.02
PGSC0003DMT400035470	Potato	plastid	56.55	53.67
KRH00894	Soybean	plastid	55.95	53.11
AT3G54900.1	Thale cress	plastid	51.79	50.29
Bra003199.1-P	Field mustard	plastid	53.57	49.72
KRH40338	Soybean	plastid	47.02	49.69
CDY07516	Canola	plastid	52.38	48.62
CDX67614	Canola	plastid	52.38	48.62
Os01t0530400-01	Rice	mitochondrion	26.19	23.78
Os01t0174900-01	Rice	mitochondrion	26.19	23.78
Os12t0175500-01	Rice	plastid	38.69	22.81
Os10t0500700-01	Rice	cytosol	36.9	12.63

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:4334801	ProteinID:AAO20065.1	ProteinID:ABF99928.1	EMBL:AK059425
ProteinID:BAF13827.1	ProteinID:BAS87384.1	ProteinID:EEE60311.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009941	GO:GO:0009987	GO:GO:0015035	GO:GO:0015036
GO:GO:0015297	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0046872	GO:GO:0051536
GO:GO:0051537	GO:GO:0055085	GO:GO:0055114	InterPro:GRX_PICOT-like	InterPro:Glutaredoxin	InterPro:IPR002109
InterPro:Monothiol_GRX-rel	EnsemblPlantsGene:Os03g0851200	EnsemblPlants:Os03t0851200-01	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10293
PANTHER:PTHR10293:SF37	UniProt:Q851Y7	SUPFAM:SSF52833	TIGRFAMs:TIGR00365	InterPro:Thioredoxin-like_sf	UniParc:UPI0000002792
RefSeq:XP_015630443.1	SEG:seg	:	:	:	:

Description

GLUTAREDOXIN 11Similar to CAXIP1 protein. (Os03t0851200-01)

Coordinates

chr3:+:35830364..35832497

Molecular Weight (calculated)

17834.6 Da

IEP (calculated)

8.488

GRAVY (calculated)

0.083

Length

168 amino acids

Sequence
(BLAST)

001: MAATAAASVA AISPLPGASL PRPVSARVPL LPRASPPTWR LSVGSARARS TRCLAAAGGG GLAPEMRATL DKVVGSHKVV LFMKGTKDFP QCGFSHTVVQ
101: ILRSLDVPFE TLDVLANEAL RQGLKEYSSW PTFPQLYIDG EFFGGCDITV DAYKSGELQE TLEKAMLS

Best Arabidopsis Sequence Match ( AT3G54900.1 )
(BLAST)

001: MALRSVKTPT LITSVAVVSS SVTNKPHSIR FSLKPTSALV VHNHQLSFYG SNLKLKPTKF RCSASALTPQ LKDTLEKLVN SEKVVLFMKG TRDFPMCGFS
101: NTVVQILKNL NVPFEDVNIL ENEMLRQGLK EYSNWPTFPQ LYIGGEFFGG CDITLEAFKT GELQEEVEKA MCS

Arabidopsis Description

GRXS14Monothiol glutaredoxin-S14, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84Y95]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.