Factsheet for Bra003199.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009080.1-P
Bra041065.1-P
Bra041074.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54900.1	Bra041065.1-P	AT3G50780.1	21798944
AT3G54900.1	Bra041074.1-P	AT3G50780.1	21798944
AT3G54900.1	Bra009080.1-P	AT5G09830.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67614	Canola	plastid	97.24	97.24
CDY07516	Canola	plastid	92.82	92.82
AT3G54900.1	Thale cress	plastid	79.56	83.24
Bra007110.1-P	Field mustard	plastid	79.01	82.18
KRH40339	Soybean	cytosol	5.52	58.82
KRH00894	Soybean	plastid	53.59	54.8
KRH40338	Soybean	plastid	48.07	54.72
TraesCS5D01G542400.1	Wheat	plastid	49.17	54.6
Solyc02g082200.2.1	Tomato	plastid	52.49	53.98
TraesCS5B01G545100.1	Wheat	plastid	49.17	53.94
Os03t0851200-01	Rice	nucleus, plastid	49.72	53.57
Zm00001d012845_P001	Maize	plastid	50.83	53.49
TraesCS4A01G330300.1	Wheat	plastid	48.07	53.37
PGSC0003DMT400035470	Potato	plastid	51.93	53.11
EER93091	Sorghum	plastid	49.72	52.33
GSMUA_Achr6P15060_001	Banana	plastid	50.28	52.3
Zm00001d034857_P001	Maize	plastid	49.17	51.74
HORVU5Hr1G122340.1	Barley	plastid	47.51	44.1
Bra021125.1-P	Field mustard	mitochondrion	27.07	29.34
Bra027220.1-P	Field mustard	mitochondrion	27.62	29.24
Bra000047.1-P	Field mustard	plastid	33.15	20.41
Bra029532.1-P	Field mustard	cytosol	35.91	19.17
Bra000810.1-P	Field mustard	cytosol	34.81	13.24

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EnsemblPlantsGene:Bra003199	EnsemblPlants:Bra003199.1	EnsemblPlants:Bra003199.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:GRX_PICOT-like	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4CG66	InterPro:Monothiol_GRX-rel
PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10293	PANTHER:PTHR10293:SF37	SUPFAM:SSF52833	TIGRFAMs:TIGR00365
InterPro:Thioredoxin-like_sf	UniParc:UPI0002541444	SEG:seg	:	:	:

Description

AT3G54900 (E=4e-066) CXIP1, ATGRXCP | CXIP1 (CAX INTERACTING PROTEIN 1); antiporter/ glutathione disulfide oxidoreductase

Coordinates

chrA07:-:11823793..11824338

Molecular Weight (calculated)

19939.1 Da

IEP (calculated)

8.977

GRAVY (calculated)

-0.087

Length

181 amino acids

Sequence
(BLAST)

001: MALRSIKTPS VTPTAAVSSS VINKPQSHRF VSKPSASLAV HNLHQPISIT RSNLLPKLKP SSPAAKFRCS ASAALTPQLR DTLEKLVNSE KVVLFMKGTR
101: DFPMCGFSNT VVQILKNLNV PFEDVNILEN EMLRQGLKEY SNWPTFPQLY IGGEFFGGCD ITLEAFQSGE LQEVVERAIC S

Best Arabidopsis Sequence Match ( AT3G54900.1 )
(BLAST)

001: MALRSVKTPT LITSVAVVSS SVTNKPHSIR FSLKPTSALV VHNHQLSFYG SNLKLKPTKF RCSASALTPQ LKDTLEKLVN SEKVVLFMKG TRDFPMCGFS
101: NTVVQILKNL NVPFEDVNIL ENEMLRQGLK EYSNWPTFPQ LYIGGEFFGG CDITLEAFKT GELQEEVEKA MCS

Arabidopsis Description

GRXS14Monothiol glutaredoxin-S14, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84Y95]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.