Factsheet for Bra041074.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
extracellular 1
peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73793	Canola	mitochondrion	96.3	96.3
Bra041065.1-P	Field mustard	cytosol	69.14	25.34
KRH08332	Soybean	cytosol	54.32	13.66
AT3G50780.1	Thale cress	cytosol	86.42	13.46
GSMUA_Achr7P08160_001	Banana	cytosol	61.73	13.23
KRH69973	Soybean	cytosol	44.44	13.0
Os12t0596600-01	Rice	cytosol	35.8	12.45
Zm00001d034194_P002	Maize	cytosol	67.9	10.3
KRH76896	Soybean	cytosol	65.43	10.15
Os03t0769400-01	Rice	cytosol	65.43	10.15
HORVU5Hr1G098300.1	Barley	cytosol	65.43	10.13
TraesCS5B01G409500.1	Wheat	cytosol	65.43	10.11
TraesCS5D01G414700.1	Wheat	cytosol	65.43	10.11
VIT_04s0023g01000.t01	Wine grape	cytosol	65.43	10.11
KRH28572	Soybean	cytosol	64.2	10.1
GSMUA_Achr2P17200_001	Banana	cytosol	62.96	10.06
TraesCS5A01G404600.1	Wheat	cytosol	64.2	9.9
KXG37471	Sorghum	cytosol	64.2	9.89
Os07t0123500-01	Rice	cytosol	64.2	9.87
PGSC0003DMT400026018	Potato	cytosol	64.2	9.7
KXG34316	Sorghum	cytosol	64.2	9.58
Solyc02g089950.1.1	Tomato	cytosol	64.2	9.44
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	60.49	9.32
Zm00001d007975_P001	Maize	cytosol	61.73	9.17
OQU85769	Sorghum	mitochondrion	16.05	9.09
TraesCS5A01G060900.1	Wheat	cytosol	56.79	8.83
Zm00001d020128_P001	Maize	mitochondrion	33.33	8.82
TraesCS5D01G072400.2	Wheat	cytosol	56.79	8.78
HORVU5Hr1G016360.5	Barley	cytosol	56.79	8.76
TraesCS5B01G071200.2	Wheat	cytosol	56.79	8.75
Zm00001d030950_P001	Maize	mitochondrion	54.32	8.3
GSMUA_Achr6P34610_001	Banana	cytosol	54.32	8.18
OQU79497	Sorghum	mitochondrion	54.32	7.53
Zm00001d030947_P001	Maize	plastid	46.91	6.88
Bra020266.1-P	Field mustard	plastid	41.98	6.87
Bra027781.1-P	Field mustard	plastid	43.21	6.55
KRH08334	Soybean	cytosol	16.05	5.88
KRH69974	Soybean	cytosol	16.05	5.86
GSMUA_Achr4P28120_001	Banana	cytosol	46.91	5.84

Protein Annotations

EnsemblPlants:Bra041074.1	EnsemblPlants:Bra041074.1-P	EnsemblPlantsGene:Bra041074	InterPro:BTB/POZ_dom_prot	PANTHER:PTHR31060	PANTHER:PTHR31060:SF28
UniParc:UPI000253ECAA	UniProt:M4FIZ5	MapMan:35.1	:	:	:

Description

AT3G50780 (E=7e-026) | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PRLI-interacting factor-related (TAIR:AT1G63850.1); Has 173 Blast hits to 173 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

Coordinates

chrScaffold000460:-:6855..8920

Molecular Weight (calculated)

9379.2 Da

IEP (calculated)

11.278

GRAVY (calculated)

-0.500

Length

81 amino acids

Sequence
(BLAST)

1: MNQRLMRQSV TRVLRVLKVA ELLGFDQQRI LMSWLGSFLN GGDGCPNLQR AFEVWWRRSF VRPYSDRQGS GVSQTDSTSK E

Best Arabidopsis Sequence Match ( AT3G50780.2 )
(BLAST)

001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE

Arabidopsis Description

BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.