CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76896	Soybean	cytosol	94.76	93.49
KRH08332	Soybean	cytosol	49.13	78.57
KRH69973	Soybean	cytosol	41.75	77.62
VIT_04s0023g01000.t01	Wine grape	cytosol	74.56	73.28
KRH08334	Soybean	cytosol	30.87	71.95
KRH69974	Soybean	cytosol	30.29	70.27
GSMUA_Achr7P08160_001	Banana	cytosol	49.9	67.99
PGSC0003DMT400026018	Potato	cytosol	70.29	67.54
CDX73793	Canola	mitochondrion	10.29	65.43
Solyc02g089950.1.1	Tomato	cytosol	69.13	64.61
Bra041065.1-P	Field mustard	cytosol	27.57	64.25
Bra041074.1-P	Field mustard	mitochondrion	10.1	64.2
CDX77940	Canola	mitochondrion	31.46	63.53
GSMUA_Achr2P17200_001	Banana	cytosol	62.14	63.12
AT3G50780.1	Thale cress	cytosol	62.33	61.73
CDX77942	Canola	mitochondrion	32.82	61.68
CDX77944	Canola	cytosol	60.19	60.55
Os12t0596600-01	Rice	cytosol	27.38	60.52
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	58.45	57.22
KXG37471	Sorghum	cytosol	58.45	57.22
Os03t0769400-01	Rice	cytosol	57.67	56.9
TraesCS5B01G409500.1	Wheat	cytosol	56.31	55.34
HORVU5Hr1G098300.1	Barley	cytosol	56.12	55.26
Zm00001d034194_P002	Maize	cytosol	57.28	55.24
TraesCS5A01G404600.1	Wheat	cytosol	56.31	55.24
TraesCS5D01G414700.1	Wheat	cytosol	55.92	54.96
Os07t0123500-01	Rice	cytosol	55.53	54.27
TraesCS5A01G060900.1	Wheat	cytosol	52.82	52.21
HORVU5Hr1G016360.5	Barley	cytosol	53.01	52.0
TraesCS5B01G071200.2	Wheat	cytosol	52.82	51.71
TraesCS5D01G072400.2	Wheat	cytosol	52.23	51.34
GSMUA_Achr6P34610_001	Banana	cytosol	53.01	50.74
KXG34316	Sorghum	cytosol	53.01	50.28
Zm00001d007975_P001	Maize	cytosol	51.26	48.44
Zm00001d030950_P001	Maize	mitochondrion	47.96	46.6
Zm00001d030947_P001	Maize	plastid	46.8	43.66
OQU85769	Sorghum	mitochondrion	12.04	43.36
GSMUA_Achr4P28120_001	Banana	cytosol	53.2	42.09
Zm00001d020128_P001	Maize	mitochondrion	24.85	41.83
OQU79497	Sorghum	mitochondrion	46.41	40.92
KRH41224	Soybean	mitochondrion	35.92	34.39
KRG88696	Soybean	plastid	32.43	33.81
KRH59948	Soybean	cytosol, plastid	36.12	32.98
KRH24978	Soybean	plastid	32.04	32.8
KRH64045	Soybean	plastid	26.99	27.2
KRH53894	Soybean	plastid	26.21	26.84
KRH59568	Soybean	mitochondrion, plastid	25.63	25.73
KRH24478	Soybean	mitochondrion	19.42	20.62
KRH29466	Soybean	plastid	19.03	19.88

Protein Annotations

EMBL:ACUP02006757	EnsemblPlants:KRH28572	EnsemblPlantsGene:GLYMA_11G062200	EntrezGene:100819810	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom_prot
PANTHER:PTHR31060	PANTHER:PTHR31060:SF5	ProteinID:KRH28572	ProteinID:KRH28572.1	ProteinID:KRH28573.1	ProteinID:KRH28574.1
SEG:seg	UniParc:UPI000233CC9E	UniProt:I1LHK8	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr11:+:4683524..4687302

Molecular Weight (calculated)

57758.9 Da

IEP (calculated)

7.702

GRAVY (calculated)

-0.275

Length

515 amino acids

Sequence
(BLAST)

001: MGDIRLTRVE QGQTKIRNVP IAVTPEGFWC CPTPVGFQKS LKPQNPLNKL KPSSPPPKPS SQKKAVSESQ RKTVPSPSRL AVSDAQQCND DPERPPTSTS
101: VPAQRAPKKV AIEFGEPGTF DMKLLLLGKQ GFCVKLSVHR DVLIEKSSFF ADKLSEQSSL SCLQVDDCED VEIYVETVGL MYCKEMKQQL MKQSVSRILR
201: ILKVAEFLGF SSCIQSCLEY LEAVPWNGKE EEEKVIATVL RLQGEGIGVN PVLKRVSPDI SNAPKDTLSH IVELVLKSNE ERGRREMKSI VLKLLRENNS
301: LPSSSGSADL CNDMINKSCR RCMDSLLCLF NQVAEPGFSD NKEPVVKHIA LEADNLSWLL EILVDKQAAE DFALMWANQQ ELAALHGKLP IVFRYHVSCI
401: SGRLYVGIGR GEVLPSKNTR QFLLQTWLQP LINDYNWLQH GCGSFDRKLV EEGIGRTILT LPLEDQQSIL LSWVGSFLKT GDGCPNLQRA FEVWWRRTFI
501: RPYVEGQTIN VMPDT

Best Arabidopsis Sequence Match ( AT3G50780.2 )
(BLAST)

001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE

Arabidopsis Description

BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.