Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G414700.1 | Wheat | cytosol | 96.95 | 97.14 |
| TraesCS5B01G409500.1 | Wheat | cytosol | 96.57 | 96.76 |
| HORVU5Hr1G098300.1 | Barley | cytosol | 95.24 | 95.6 |
| Os03t0769400-01 | Rice | cytosol | 85.14 | 85.63 |
| KXG37471 | Sorghum | cytosol | 83.05 | 82.89 |
| Zm00001d034194_P002 | Maize | cytosol | 80.95 | 79.59 |
| GSMUA_Achr9P26390_001 | Banana | cytosol, nucleus, peroxisome | 66.67 | 66.54 |
| CDX73793 | Canola | mitochondrion | 10.1 | 65.43 |
| Bra041074.1-P | Field mustard | mitochondrion | 9.9 | 64.2 |
| Bra041065.1-P | Field mustard | cytosol | 26.86 | 63.8 |
| VIT_04s0023g01000.t01 | Wine grape | cytosol | 62.48 | 62.6 |
| KRH08332 | Soybean | cytosol | 38.1 | 62.11 |
| KRH69973 | Soybean | cytosol | 32.57 | 61.73 |
| CDX77940 | Canola | mitochondrion | 29.71 | 61.18 |
| CDX77942 | Canola | mitochondrion | 31.05 | 59.49 |
| GSMUA_Achr6P34610_001 | Banana | cytosol | 59.62 | 58.18 |
| TraesCS5A01G060900.1 | Wheat | cytosol | 56.95 | 57.39 |
| PGSC0003DMT400026018 | Potato | cytosol | 58.48 | 57.28 |
| KRH28572 | Soybean | cytosol | 55.24 | 56.31 |
| KRH76896 | Soybean | cytosol | 55.43 | 55.75 |
| Solyc02g089950.1.1 | Tomato | cytosol | 58.29 | 55.54 |
| CDX77944 | Canola | cytosol | 54.1 | 55.47 |
| AT3G50780.1 | Thale cress | cytosol | 53.52 | 54.04 |
| KRH08334 | Soybean | cytosol | 18.67 | 44.34 |
| KRH69974 | Soybean | cytosol | 18.48 | 43.69 |
| TraesCS4A01G349300.1 | Wheat | mitochondrion | 26.48 | 26.03 |
| TraesCS4A01G260100.1 | Wheat | mitochondrion | 20.95 | 23.26 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G404600.1 | EnsemblPlantsGene:TraesCS5A01G404600 | Gene3D:3.30.710.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:BTB/POZ_dom | InterPro:BTB/POZ_dom_prot | InterPro:IPR000210 | InterPro:SKP1/BTB/POZ_sf | PANTHER:PTHR31060 | PANTHER:PTHR31060:SF28 |
| PFscan:PS50097 | SEG:seg | SUPFAM:SSF54695 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr5A:+:596462904..596465178
Molecular Weight (calculated)
58529.0 Da
IEP (calculated)
8.043
GRAVY (calculated)
-0.294
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MADFKVGSLD ARATKFRTVP IAVTPEGFWC CPSQTVLQKT VKNQNQQTRP KVGASPPASK ASSVQRAPTI SSERRTHSTP TRSRANSDEQ RCPAAADNAT
101: SNPPKAASER LPKQHKISVG FGQIEMSDLR VVLYGKDGVA VKMSVHKNIL AENSTFFADK LSRQSPVSSI EVPDCEDVEI YVETVGLMYC NDVKQRLIKK
201: SVPRVLRILK VAEHLGFRAC VLSCLNYLEA VPWAGEEEEN VVSSVRHLQT EDYGVTPILK RVCSDLTSPP NDTFVRIIEL VLKSSDDRGR REMKSLVLKL
301: LKESSSSCAS SSADLCVETL YSYCQNCLES LLTLFQQASD SGFSEQSLEL KEPVLRQITL EADNLLWLTE ILAGRNAAEE FAGLWSNQRE LAGLHSKLPT
401: KSRHLVSCVT ARLFVAIGKG EMLPSKDTRQ LLLDVWLQPL MDDYNWLQHG CRSFDRTVVE EGIGSTILTL PLEDQQTILL SWLGSFLKVG NSCPNLQKAF
501: EVWWRRTFVR PYVEQQGSRS QSGRS
101: SNPPKAASER LPKQHKISVG FGQIEMSDLR VVLYGKDGVA VKMSVHKNIL AENSTFFADK LSRQSPVSSI EVPDCEDVEI YVETVGLMYC NDVKQRLIKK
201: SVPRVLRILK VAEHLGFRAC VLSCLNYLEA VPWAGEEEEN VVSSVRHLQT EDYGVTPILK RVCSDLTSPP NDTFVRIIEL VLKSSDDRGR REMKSLVLKL
301: LKESSSSCAS SSADLCVETL YSYCQNCLES LLTLFQQASD SGFSEQSLEL KEPVLRQITL EADNLLWLTE ILAGRNAAEE FAGLWSNQRE LAGLHSKLPT
401: KSRHLVSCVT ARLFVAIGKG EMLPSKDTRQ LLLDVWLQPL MDDYNWLQHG CRSFDRTVVE EGIGSTILTL PLEDQQTILL SWLGSFLKVG NSCPNLQKAF
501: EVWWRRTFVR PYVEQQGSRS QSGRS
001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE
Arabidopsis Description
BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.