CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77940	Canola	mitochondrion	91.24	98.04
CDX73793	Canola	mitochondrion	27.74	93.83
Bra041065.1-P	Field mustard	cytosol	56.2	69.68
KRH08332	Soybean	cytosol	57.66	49.07
KRH69973	Soybean	cytosol	48.54	48.01
CDX77944	Canola	cytosol	88.69	47.46
AT3G50780.1	Thale cress	cytosol	83.21	43.85
Os12t0596600-01	Rice	cytosol	36.5	42.92
GSMUA_Achr7P08160_001	Banana	cytosol	56.2	40.74
VIT_04s0023g01000.t01	Wine grape	cytosol	65.33	34.16
KRH76896	Soybean	cytosol	62.77	32.95
KRH28572	Soybean	cytosol	61.68	32.82
PGSC0003DMT400026018	Potato	cytosol	63.5	32.46
KXG37471	Sorghum	cytosol	61.68	32.13
Zm00001d034194_P002	Maize	cytosol	62.41	32.02
GSMUA_Achr2P17200_001	Banana	cytosol	58.03	31.36
HORVU5Hr1G098300.1	Barley	cytosol	59.85	31.36
TraesCS5D01G414700.1	Wheat	cytosol	59.85	31.3
Solyc02g089950.1.1	Tomato	cytosol	62.77	31.22
TraesCS5B01G409500.1	Wheat	cytosol	59.49	31.11
TraesCS5A01G404600.1	Wheat	cytosol	59.49	31.05
Os03t0769400-01	Rice	cytosol	58.76	30.84
Os07t0123500-01	Rice	cytosol	57.3	29.79
TraesCS5A01G060900.1	Wheat	cytosol	55.47	29.17
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	55.84	29.09
TraesCS5D01G072400.2	Wheat	cytosol	55.11	28.82
HORVU5Hr1G016360.5	Barley	cytosol	55.11	28.76
TraesCS5B01G071200.2	Wheat	cytosol	55.11	28.71
KXG34316	Sorghum	cytosol	55.11	27.81
Zm00001d007975_P001	Maize	cytosol	53.28	26.79
GSMUA_Achr6P34610_001	Banana	cytosol	52.19	26.58
Zm00001d030950_P001	Maize	mitochondrion	50.0	25.85
Zm00001d020128_P001	Maize	mitochondrion	27.74	24.84
Zm00001d030947_P001	Maize	plastid	47.81	23.73
GSMUA_Achr4P28120_001	Banana	cytosol	52.55	22.12
OQU79497	Sorghum	mitochondrion	47.08	22.09
CDY08328	Canola	cytosol, plastid	39.42	20.3
CDY38217	Canola	plastid	39.05	20.07
CDY09229	Canola	plastid	36.13	19.92
OQU85769	Sorghum	mitochondrion	10.22	19.58
CDX71164	Canola	cytosol	23.72	13.54
KRH08334	Soybean	cytosol	6.57	8.14
KRH69974	Soybean	cytosol	6.57	8.11

Protein Annotations

EnsemblPlants:CDX77942	EnsemblPlantsGene:GSBRNA2T00129194001	InterPro:BTB/POZ_dom_prot	PANTHER:PTHR31060	PANTHER:PTHR31060:SF5	ProteinID:CDX77942
ProteinID:CDX77942.1	SEG:seg	UniParc:UPI0004EF3431	MapMan:35.1	:	:

Description

BnaA09g31370D

Coordinates

chrLK031814:-:156426..157531

Molecular Weight (calculated)

31044.7 Da

IEP (calculated)

10.151

GRAVY (calculated)

-0.221

Length

274 amino acids

Sequence
(BLAST)

001: MKTCGRNTRK IQFHKLVSSL SNQRLIRQSV TRVLRVLKVA ELLGFGSCVQ SCLDYLEADK LCLGLKVISS ILRLKTEGVS VVTTPVLKRV ASSSVDPPKE
101: TLSRIIELVL RSKEEKSPER QAAEEFSVTW ANQTELALLH EKLPLVSRYH ISRVTSRLFV GIGRGELLPS KDTRLLLLTT WLQPLFKDYN WLQHGCRSFD
201: GKLVEEGIGR TILTLPLEDQ QRILMSWLGS FLNGGDGCPN LQRAFEVWWR RSFVRPYSDR QGSGVSQTDS TSKE

Best Arabidopsis Sequence Match ( AT3G50780.2 )
(BLAST)

001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE

Arabidopsis Description

BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.