Factsheet for Bra041065.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra041074.1-P	Field mustard	mitochondrion	25.34	69.14
CDX77940	Canola	mitochondrion	68.78	59.61
CDX77942	Canola	mitochondrion	69.68	56.2
KRH69973	Soybean	cytosol	69.23	55.23
Os12t0596600-01	Rice	cytosol	55.66	52.79
KRH08332	Soybean	cytosol	68.78	47.2
CDX77944	Canola	cytosol	100.0	43.16
AT3G50780.1	Thale cress	cytosol	90.95	38.65
GSMUA_Achr7P08160_001	Banana	cytosol	62.44	36.51
VIT_04s0023g01000.t01	Wine grape	cytosol	70.59	29.77
GSMUA_Achr2P17200_001	Banana	cytosol	63.8	27.81
PGSC0003DMT400026018	Potato	cytosol	66.97	27.61
KRH76896	Soybean	cytosol	65.16	27.59
KRH28572	Soybean	cytosol	64.25	27.57
TraesCS5D01G414700.1	Wheat	cytosol	64.71	27.29
Os03t0769400-01	Rice	cytosol	64.25	27.2
TraesCS5B01G409500.1	Wheat	cytosol	63.8	26.91
TraesCS5A01G404600.1	Wheat	cytosol	63.8	26.86
Solyc02g089950.1.1	Tomato	cytosol	66.52	26.68
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	63.35	26.62
KXG37471	Sorghum	cytosol	63.35	26.62
HORVU5Hr1G098300.1	Barley	cytosol	62.44	26.39
Os07t0123500-01	Rice	cytosol	61.54	25.81
Zm00001d034194_P002	Maize	cytosol	61.99	25.66
Zm00001d020128_P001	Maize	mitochondrion	34.84	25.16
KXG34316	Sorghum	cytosol	57.47	23.39
TraesCS5A01G060900.1	Wheat	cytosol	54.75	23.22
HORVU5Hr1G016360.5	Barley	cytosol	54.75	23.05
TraesCS5D01G072400.2	Wheat	cytosol	54.3	22.9
TraesCS5B01G071200.2	Wheat	cytosol	54.3	22.81
GSMUA_Achr6P34610_001	Banana	cytosol	55.2	22.68
Zm00001d007975_P001	Maize	cytosol	54.3	22.02
Zm00001d030950_P001	Maize	mitochondrion	49.32	20.57
Bra020266.1-P	Field mustard	plastid	43.44	19.39
GSMUA_Achr4P28120_001	Banana	cytosol	55.2	18.74
Zm00001d030947_P001	Maize	plastid	46.61	18.66
Bra027781.1-P	Field mustard	plastid	44.34	18.35
OQU79497	Sorghum	mitochondrion	48.42	18.32
OQU85769	Sorghum	mitochondrion	0.0	0.0
KRH69974	Soybean	cytosol	0.0	0.0
KRH08334	Soybean	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra041065.1	EnsemblPlants:Bra041065.1-P	EnsemblPlantsGene:Bra041065	InterPro:BTB/POZ_dom_prot	PANTHER:PTHR31060	PANTHER:PTHR31060:SF5
SEG:seg	UniParc:UPI000253EC3F	UniProt:M4FIY6	MapMan:35.1	:	:

Description

AT3G50780 (E=4e-106) | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PRLI-interacting factor-related (TAIR:AT1G63850.1); Has 173 Blast hits to 173 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

Coordinates

chrScaffold000437:+:8431..9096

Molecular Weight (calculated)

25226.0 Da

IEP (calculated)

5.780

GRAVY (calculated)

-0.340

Length

221 amino acids

Sequence
(BLAST)

001: MKSIVLKLLR EQNGNNVAEN FNETIYSSCQ SCLDSVLSLF RQDESDAKQI GVEADNLTWL LDVLAERQAA EEFSVTWANQ KELALLHEKV PLVSRYHISR
101: VTSRLFVGIG RGELLPSKDT RLLLLTTWLQ PLFKDYNWLQ HGCRSFDGKL VEEGIGRTIL TLPLEDQQRI LMSWLGSFLN GGDGCPNLQR AFEVWWRRSF
201: VRPYSDRQGS GVSQTDSTSK E

Best Arabidopsis Sequence Match ( AT3G50780.2 )
(BLAST)

001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE

Arabidopsis Description

BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.