Factsheet for TraesCS5B01G409500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G404600.1	Wheat	cytosol	96.76	96.57
TraesCS5D01G414700.1	Wheat	cytosol	96.56	96.56
HORVU5Hr1G098300.1	Barley	cytosol	95.23	95.41
Os03t0769400-01	Rice	cytosol	84.92	85.25
KXG37471	Sorghum	cytosol	83.4	83.08
Zm00001d034194_P002	Maize	cytosol	81.3	79.78
CDX73793	Canola	mitochondrion	10.31	66.67
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	66.03	65.78
Bra041074.1-P	Field mustard	mitochondrion	10.11	65.43
Bra041065.1-P	Field mustard	cytosol	26.91	63.8
VIT_04s0023g01000.t01	Wine grape	cytosol	62.79	62.79
KRH08332	Soybean	cytosol	38.17	62.11
KRH69973	Soybean	cytosol	32.82	62.09
CDX77940	Canola	mitochondrion	29.77	61.18
CDX77942	Canola	mitochondrion	31.11	59.49
PGSC0003DMT400026018	Potato	cytosol	58.59	57.28
GSMUA_Achr6P34610_001	Banana	cytosol	58.59	57.06
TraesCS5B01G071200.2	Wheat	cytosol	56.68	56.46
KRH28572	Soybean	cytosol	55.34	56.31
KRH76896	Soybean	cytosol	55.73	55.94
CDX77944	Canola	cytosol	54.2	55.47
Solyc02g089950.1.1	Tomato	cytosol	58.21	55.35
AT3G50780.1	Thale cress	cytosol	54.39	54.81
KRH08334	Soybean	cytosol	19.27	45.7
KRH69974	Soybean	cytosol	19.08	45.05
TraesCS2B01G413600.1	Wheat	cytosol, plastid	37.79	32.3
TraesCS5B01G523400.1	Wheat	mitochondrion	27.1	26.44
TraesCS4B01G054500.1	Wheat	mitochondrion	21.18	23.32

Protein Annotations

EnsemblPlants:TraesCS5B01G409500.1	EnsemblPlantsGene:TraesCS5B01G409500	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR31060	PANTHER:PTHR31060:SF28
PFscan:PS50097	SEG:seg	SUPFAM:SSF54695	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5B:+:584853475..584855727

Molecular Weight (calculated)

58459.9 Da

IEP (calculated)

7.737

GRAVY (calculated)

-0.309

Length

524 amino acids

Sequence
(BLAST)

001: MAEFKVGSLD ARTTKFRTVP IAVTPEGFWC CPSQTVLQKT VKNQNQQTRP KVGASPPASK ASSVQRAPTI SSERRTHSTP TRSRANSDEQ RCPSADNAAT
101: NPPKVASERP PKQHKVSVGF GQIEMSDLRV VLYGKDGVAV KMSVHKNILA ENSTFFADKL SRQSPVSSIE VPDCEDVEIY VETVGLMYCN DVKQKLIKQS
201: VPRVLRILKV AELLGFRACV LSCLNYLEAV PWAGEEEENV VSSVRHLQTE DYGVTPILKR VCPDLTSPPN DTFVRIIELV LKSSDDRGRR EMKSLVLKLL
301: KESSSSCAGS SADLCVETLY SYCQNCLESL LTLFQQASDS DFSEQSSELK EPILRQITLE ADNLLWLTEI LAGRNAAEEF AGLWSNQREL AGLHSKLPTK
401: SRHLVSCVTA RLFVAIGKGE MLPSKDTRQL LLDVWLQPLM DDYNWLQHGC RSFDRSVVEE GIGSTILTLP LEDQQTILLS WLGSFLKVGN SCPNLQKAFE
501: VWWRRTFVRP YVEQQGSRSQ SGRS

Best Arabidopsis Sequence Match ( AT3G50780.2 )
(BLAST)

001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE

Arabidopsis Description

BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.