Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0579700-01 | Rice | cytosol | 79.93 | 91.93 |
| HORVU2Hr1G094080.1 | Barley | cytosol | 90.05 | 85.45 |
| HORVU0Hr1G005290.1 | Barley | cytosol | 65.91 | 85.23 |
| KXG26972 | Sorghum | plastid | 83.52 | 84.35 |
| Zm00001d026051_P002 | Maize | cytosol, mitochondrion, plastid | 82.87 | 83.83 |
| GSMUA_Achr1P03700_001 | Banana | plastid | 65.91 | 77.54 |
| GSMUA_Achr5P10260_001 | Banana | plastid | 68.84 | 76.59 |
| GSMUA_Achr4P24950_001 | Banana | plastid | 57.59 | 69.76 |
| KRH41224 | Soybean | mitochondrion | 59.05 | 67.29 |
| CDY08328 | Canola | cytosol, plastid | 55.46 | 63.91 |
| Bra027781.1-P | Field mustard | plastid | 55.63 | 63.86 |
| CDY38217 | Canola | plastid | 55.3 | 63.6 |
| AT1G63850.1 | Thale cress | cytosol | 56.61 | 63.32 |
| KRH59948 | Soybean | cytosol, plastid | 58.08 | 63.12 |
| Solyc08g081380.2.1 | Tomato | plastid | 59.54 | 57.21 |
| PGSC0003DMT400032124 | Potato | plastid | 59.54 | 56.85 |
| PGSC0003DMT400012106 | Potato | plastid | 59.54 | 56.68 |
| VIT_02s0025g00150.t01 | Wine grape | plastid | 61.17 | 56.22 |
| TraesCS5B01G409500.1 | Wheat | cytosol | 32.3 | 37.79 |
| TraesCS5B01G071200.2 | Wheat | cytosol | 28.87 | 33.65 |
| TraesCS5B01G523400.1 | Wheat | mitochondrion | 26.1 | 29.8 |
| TraesCS4B01G054500.1 | Wheat | mitochondrion | 17.29 | 22.27 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G413600.1 | EnsemblPlantsGene:TraesCS2B01G413600 | Gene3D:3.30.710.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:BTB/POZ_dom | InterPro:BTB/POZ_dom_prot | InterPro:IPR000210 | InterPro:SKP1/BTB/POZ_sf | PANTHER:PTHR31060 | PANTHER:PTHR31060:SF3 |
| PFscan:PS50097 | SEG:seg | SUPFAM:SSF54695 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2B:-:589879417..589881346
Molecular Weight (calculated)
67878.7 Da
IEP (calculated)
6.990
GRAVY (calculated)
-0.390
Length
613 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSRSSRP HPHPKKPSPP PPSHSHLVPH DLSSWCCAPH PAPSTSHFHS PAAAARGAAG PMDHPPPQQP AAGASSYASP NPPSYTQTQS YPSSYTKFNS
101: ALNAGLLNPM SPPPLPIDKT RSSPTLFDMM ANEQDYQPRS AAHSAPPQHQ PHPHHPLAPA RSMDRQALLQ DRVAELIGSC SPGNQFNDAD SSDVRLTLSS
201: KDGLSLTLCV HRNILVAHSR FFAAKLSDRW SKQQRTLPHI VEISDCDDVE VYVETLRLMY CKDLRRRLMR EDVTKVLGIL KVSAAIVFDA GVLSCLEYLE
301: AAPWAEDDDE KVAALLTQLH LENSGAGEVL KRVSLELTPS VVTEEVEMGA NCNGGSNVGG GEEVLVRLLQ VVLEGKDEKA RREMKGLVSK MLRENSASRG
401: GAIGGDLRKE SLYSACNGCL CLLREQFVRA AGGDQSEVAQ IARQADNLHW MLDILVERQI AEDFLRTWAM QNELAEMHGK VPAIHRYEVS RVTARLFVGV
501: GKGQILVSKE ARSQLLSTWL EPFYEDFGWM RRACKGLDRH LIEEGLANTI LTLPLATQQE IFLAWFNRFL NSGEDCPNIQ RGFEVWWRRA FWKRSAEPEQ
601: PPRLRITAIC DNS
101: ALNAGLLNPM SPPPLPIDKT RSSPTLFDMM ANEQDYQPRS AAHSAPPQHQ PHPHHPLAPA RSMDRQALLQ DRVAELIGSC SPGNQFNDAD SSDVRLTLSS
201: KDGLSLTLCV HRNILVAHSR FFAAKLSDRW SKQQRTLPHI VEISDCDDVE VYVETLRLMY CKDLRRRLMR EDVTKVLGIL KVSAAIVFDA GVLSCLEYLE
301: AAPWAEDDDE KVAALLTQLH LENSGAGEVL KRVSLELTPS VVTEEVEMGA NCNGGSNVGG GEEVLVRLLQ VVLEGKDEKA RREMKGLVSK MLRENSASRG
401: GAIGGDLRKE SLYSACNGCL CLLREQFVRA AGGDQSEVAQ IARQADNLHW MLDILVERQI AEDFLRTWAM QNELAEMHGK VPAIHRYEVS RVTARLFVGV
501: GKGQILVSKE ARSQLLSTWL EPFYEDFGWM RRACKGLDRH LIEEGLANTI LTLPLATQQE IFLAWFNRFL NSGEDCPNIQ RGFEVWWRRA FWKRSAEPEQ
601: PPRLRITAIC DNS
001: MDYSTATTTA GNGYSSPRDS SFPSSFTKFN SALTAGLLNP MSPPPPPAMH DKTRSSPTLF EMMASEADTI GKVPVQIHNG VLPSPSSSSS SSSAAATAAR
101: TTNVNHLVIS AQDKQALAMQ RISDLLVIRS PGNQFNDPNS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAMKLSDRWS KQQLPPSSSP YIVEISDCDD
201: VEVYIETLML MYCRDLRKKM MRHDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE EYRIASLLSE LHLENVGATE VLRRVSVEAS NGNNGSNGGS
301: NDEVLLNLLH IVLEGKDEKA RRDMKTLVSK MLRENSSGND LRKESLYLAC DGCLHKLKRQ FLQAAESDLE NVDQIARQAD NLHWILDILI DRQIAEDFIV
401: MWASLSELSE VHSKVPVVHR FEISRVTARI FVGIGKGQIL TPKEVRCLLL RNWLTPFYDD FGWMRRASKG LDRYLIEDGL SNTILTLPLA WQQEFFLAWF
501: DRFLNSNEDC PNIQRGFEVW WRRAFWRRKE QSQEPARLRV TASATENS
101: TTNVNHLVIS AQDKQALAMQ RISDLLVIRS PGNQFNDPNS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAMKLSDRWS KQQLPPSSSP YIVEISDCDD
201: VEVYIETLML MYCRDLRKKM MRHDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE EYRIASLLSE LHLENVGATE VLRRVSVEAS NGNNGSNGGS
301: NDEVLLNLLH IVLEGKDEKA RRDMKTLVSK MLRENSSGND LRKESLYLAC DGCLHKLKRQ FLQAAESDLE NVDQIARQAD NLHWILDILI DRQIAEDFIV
401: MWASLSELSE VHSKVPVVHR FEISRVTARI FVGIGKGQIL TPKEVRCLLL RNWLTPFYDD FGWMRRASKG LDRYLIEDGL SNTILTLPLA WQQEFFLAWF
501: DRFLNSNEDC PNIQRGFEVW WRRAFWRRKE QSQEPARLRV TASATENS
Arabidopsis Description
BTB/POZ domain-containing protein At1g63850 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.