CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026051_P002	Maize	cytosol, mitochondrion, plastid	95.06	95.21
Os04t0579700-01	Rice	cytosol	81.22	92.5
TraesCS2B01G413600.1	Wheat	cytosol, plastid	84.35	83.52
HORVU0Hr1G005290.1	Barley	cytosol	63.26	81.01
GSMUA_Achr1P03700_001	Banana	plastid	66.56	77.54
HORVU2Hr1G094080.1	Barley	cytosol	81.38	76.47
GSMUA_Achr5P10260_001	Banana	plastid	68.86	75.86
GSMUA_Achr4P24950_001	Banana	plastid	58.65	70.36
KRH41224	Soybean	mitochondrion	60.3	68.03
KRH59948	Soybean	cytosol, plastid	59.31	63.83
AT1G63850.1	Thale cress	cytosol	57.17	63.32
CDY08328	Canola	cytosol, plastid	55.35	63.16
Bra027781.1-P	Field mustard	plastid	55.52	63.11
CDY38217	Canola	plastid	55.19	62.85
Solyc08g081380.2.1	Tomato	plastid	60.79	57.84
PGSC0003DMT400032124	Potato	plastid	61.12	57.79
PGSC0003DMT400012106	Potato	plastid	61.28	57.76
VIT_02s0025g00150.t01	Wine grape	plastid	60.96	55.47
OQU85769	Sorghum	mitochondrion	8.57	36.36
KXG37471	Sorghum	cytosol	31.47	36.31
KXG34316	Sorghum	cytosol	31.3	34.99
OQU79497	Sorghum	mitochondrion	29.98	31.16
OQU90655	Sorghum	mitochondrion	27.02	31.12
EES15778	Sorghum	plastid	23.23	27.22
KXG34836	Sorghum	mitochondrion, plastid	26.19	27.18
EER93543	Sorghum	mitochondrion	17.3	21.97

Protein Annotations

EnsemblPlants:KXG26972	EnsemblPlantsGene:SORBI_3006G188800	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR31060	PANTHER:PTHR31060:SF3
PFAM:PF00651	PFscan:PS50097	ProteinID:KXG26972	ProteinID:KXG26972.1	SEG:seg	SUPFAM:SSF54695
UniParc:UPI00081ABB72	UniProt:A0A1B6PMS9	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:54331337..54333531

Molecular Weight (calculated)

67066.0 Da

IEP (calculated)

6.814

GRAVY (calculated)

-0.273

Length

607 amino acids

Sequence
(BLAST)

001: MAASSRSRPL SKLSSPSHLV PLDLSTSWCC TPHGLGGHAP ALSSSSSPAR AAAHPMEPPP ASSSATSSYA TPPQPSYAPS SYPSSYTKFN SALNAGLLNP
101: MSPPPLPLDK TRSSPTLFDM MANEQDYHPR SAAAAAGVHS IPAPPHQPHH QLQPVRSMDR QMLLQDRIAD LIGSCSPGNQ FNDADSSDVR LTLSSKDGLS
201: VTLCVHRHIL VAHSRFFAAK LSDRWSKQQR TLPHIVEISD CDDVEVYAET LRLMYCKDLR RRLMREDVNK VLGILKVSAA IVFDAGVLSC LEYLEAAPWA
301: EDDDEKVAAL LTQLHLENSG AGEVLKRVSL ELAPSVVVEE AEVGGSCNTG NSSGGEEVLL RLLQVVLEGK DEKARREMKG LVSKMLRENS TSRGGAIGGD
401: LRKESLYSAC NGCLSLLCEQ FVRASEGDHS EVAQIARQAD NLHWMLDILV ERQIAEEFLR TWAMQTELAA MHRKVPAIHR YEVSRVTARL FVGVGKGQIL
501: VSKEARCQLL STWLEPFYED FGWMRRACKG LDRHLIEDGL ANTILTLPLA TQQEILLAWF NRFLNSGEDC PNIQRGFEVW WRRAFWKRNS EPELPSRLRI
601: TAICENS

Best Arabidopsis Sequence Match ( AT1G63850.1 )
(BLAST)

001: MDYSTATTTA GNGYSSPRDS SFPSSFTKFN SALTAGLLNP MSPPPPPAMH DKTRSSPTLF EMMASEADTI GKVPVQIHNG VLPSPSSSSS SSSAAATAAR
101: TTNVNHLVIS AQDKQALAMQ RISDLLVIRS PGNQFNDPNS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAMKLSDRWS KQQLPPSSSP YIVEISDCDD
201: VEVYIETLML MYCRDLRKKM MRHDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE EYRIASLLSE LHLENVGATE VLRRVSVEAS NGNNGSNGGS
301: NDEVLLNLLH IVLEGKDEKA RRDMKTLVSK MLRENSSGND LRKESLYLAC DGCLHKLKRQ FLQAAESDLE NVDQIARQAD NLHWILDILI DRQIAEDFIV
401: MWASLSELSE VHSKVPVVHR FEISRVTARI FVGIGKGQIL TPKEVRCLLL RNWLTPFYDD FGWMRRASKG LDRYLIEDGL SNTILTLPLA WQQEFFLAWF
501: DRFLNSNEDC PNIQRGFEVW WRRAFWRRKE QSQEPARLRV TASATENS

Arabidopsis Description

BTB/POZ domain-containing protein At1g63850 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.