CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041800_P001	Maize	plastid	77.99	76.08
Os12t0188500-01	Rice	plastid	68.15	67.37
GSMUA_Achr7P03070_001	Banana	mitochondrion	44.59	44.25
OQU90655	Sorghum	mitochondrion	44.59	43.83
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	41.7	41.78
KRH64045	Soybean	plastid	39.77	40.31
KRH53894	Soybean	plastid	39.0	40.16
KXG34836	Sorghum	mitochondrion, plastid	44.02	38.97
KRH59568	Soybean	mitochondrion, plastid	37.64	38.01
VIT_04s0044g01240.t01	Wine grape	nucleus	39.96	37.57
PGSC0003DMT400073782	Potato	cytosol, plastid	38.8	36.95
Solyc11g005950.1.1	Tomato	cytosol, plastid	38.61	36.76
AT2G13690.1	Thale cress	cytosol, plastid	38.42	36.58
CDX71164	Canola	cytosol	31.66	34.17
KXG37471	Sorghum	cytosol	24.52	24.14
KXG34316	Sorghum	cytosol	24.9	23.76
KXG26972	Sorghum	plastid	27.22	23.23
OQU79497	Sorghum	mitochondrion	25.1	22.26
OQU85769	Sorghum	mitochondrion	5.98	21.68
EER93543	Sorghum	mitochondrion	16.02	17.36

Protein Annotations

EnsemblPlants:EES15778	EnsemblPlantsGene:SORBI_3008G062900	EntrezGene:8082773	InterPro:BTB/POZ_dom_prot	PANTHER:PTHR31060	PANTHER:PTHR31060:SF9
ProteinID:EES15778	ProteinID:EES15778.1	RefSeq:XP_002441940.1	SEG:seg	UniParc:UPI0001A87FE1	UniProt:C5YT83
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:6721068..6725764

Molecular Weight (calculated)

57300.0 Da

IEP (calculated)

8.628

GRAVY (calculated)

-0.250

Length

518 amino acids

Sequence
(BLAST)

001: MPTTTSSSTA AAAQQRRRSR RKAPPPRQPW CCSFGLDPST AAATAAGGGR SLLPAPPRAK PPPQQLAPPL SRRIRSPGRV SPIDDLTLPG SAGSSVSARL
101: SSVTECPPLP PPPPPVAAAA VENPREILKL RLVDKGVILE VDELGRVRRE SKVVGKVLGE RGGEVTVEGM VEVEAFREAV DMMLEDEDEA AAMRRLGRGG
201: VARAIDVLEV SLSLMFDRGV NNCLRYLDAV PWNESEEEAI KKLVYQHSSY KAAFRDLLAR LQPESPASSA ELVVELADSI TKGTNNNARK ELRNLVNGIL
301: SKSSVYIKGD KELDSRSIYC ICHSCLNSLV VLFEESSELA HADQTSLSSI GRKGPLERIY KLVEDINWLL QILIDRQMGE EFIDLWADQK TLSSMHEQRV
401: SPMVRHELSR ISATVFIAMG SGKLHCTGDR RFAVFQAWFR PMLVDFSWLR RYPKGLNMTA LEEGIGQALL TLTLKQQQAL FLQWFEAFSG QGRECPDLIR
501: AFQVWWRRSF VRSLGSNG

Best Arabidopsis Sequence Match ( AT2G13690.1 )
(BLAST)

001: MTMGDSDLRK PTNFGTGHLS RRRSWCCSFA VPPASPDTRS ISSRNHIPAK SQQQRPKLVP CSPQSSKSAL NIVNRIDPRR ILSPGRVSPI DSDPTVTTMQ
101: ETETTQEEED DAVVVDSTPN LRSESFRAPK IEVTGSGLSE GYDARLSLKG RNGGGVLVLE LSLEVLAANS DVFSGLIAEE KKCSSSSSSL GLKNTCRIEV
201: CDVENLGVFR ETVELMFEES NVIIKKFMTM GVYRAIDVLE VAAGIKFSRA VLSCLKYLEA VPWTEDEEEK LRRLLGIYSF DDDAVSEILA RFNSNETENL
301: QDSLSKKLVW SITSCSDVNP RNELKSLVKG LLCKSSVYEK EQPEINKEDI YRAGKCCVDS LAKLFEEGSS SSSSKKEKPL IESISREVEN INWLLEIMID
401: REIAEEFVEI WGKQRRLVEM HERVSPMVRY EVSRVTGAIF IAMGKRRVQC GGEARAGLVE AWFKPMLVDF GWLQRCKKGL DMREVEEGMG QTLLTLPVKE
501: QYQVFMEWFR WFSKHGTECP NLSKAFQIWW RRSFLRGVES STCR

Arabidopsis Description

PRL1-IFGBTB/POZ domain-containing protein At2g13690 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKH2]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.