CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012880_P001	Maize	mitochondrion	82.92	85.85
HORVU5Hr1G119090.1	Barley	cytosol	24.29	81.53
Os04t0278000-01	Rice	mitochondrion, plastid	72.49	72.49
TraesCS4A01G349300.1	Wheat	mitochondrion	68.88	67.98
TraesCS5B01G523400.1	Wheat	mitochondrion	69.07	67.78
HORVU5Hr1G119100.2	Barley	cytosol	56.93	67.26
GSMUA_Achr7P03070_001	Banana	mitochondrion	57.12	57.66
KXG34836	Sorghum	mitochondrion, plastid	63.95	57.61
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	54.46	55.51
KRH64045	Soybean	plastid	46.3	47.75
KRH53894	Soybean	plastid	45.54	47.71
KRH59568	Soybean	mitochondrion, plastid	45.16	46.39
VIT_04s0044g01240.t01	Wine grape	nucleus	47.44	45.37
EES15778	Sorghum	plastid	43.83	44.59
PGSC0003DMT400073782	Potato	cytosol, plastid	45.54	44.12
Solyc11g005950.1.1	Tomato	cytosol, plastid	45.16	43.75
CDX71164	Canola	cytosol	37.19	40.83
AT2G13690.1	Thale cress	cytosol, plastid	42.13	40.81
KXG37471	Sorghum	cytosol	27.7	27.76
KXG26972	Sorghum	plastid	31.12	27.02
KXG34316	Sorghum	cytosol	27.32	26.52
OQU85769	Sorghum	mitochondrion	7.02	25.87
OQU79497	Sorghum	mitochondrion	28.46	25.68
EER93543	Sorghum	mitochondrion	16.7	18.41

Protein Annotations

EnsemblPlants:OQU90655	EnsemblPlantsGene:SORBI_3001G019200	InterPro:BTB/POZ_dom_prot	PANTHER:PTHR31060	PANTHER:PTHR31060:SF2	ProteinID:OQU90655
ProteinID:OQU90655.1	SEG:seg	UniParc:UPI000B8B9FD7	UniProt:A0A1Z5S4I4	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr1:+:1587740..1591203

Molecular Weight (calculated)

58628.6 Da

IEP (calculated)

5.304

GRAVY (calculated)

-0.321

Length

527 amino acids

Sequence
(BLAST)

001: MADSTHHTIR RAAARPRGWC CSFAGVPDSP EHRRALPASS AVGAAVPKLP PPLPPKSPLA PSSHSHHSSP SSKLAGLIDP RRILSPGRVS PIDSEGSPAV
101: AEGPPREQAA PFVAVREHED EEDGEREGER NALDLRLCLR GRDGRCVAMD LDSAVLCGSS AFFAGMVPDA SGVGDRRVDV DGIDNLEAFK EAVELMFEPD
201: AMRWLARAGV SRAIAVLEVS SSIMFDRGIE SCLKYIEAVP WNENEEEKLK HVFARCTFDE SVCKDVLARL QQQCTSGSED LTVQLVESIT SGTNNGARKE
301: MQSLVSGLLS KSSVYHKDFS GLNKEGLYQI CRSCLSSLVE LFMEDSEPVE DAGQAMTTSD SRPMIERVSK QTENLKWLFD ILLNNDMAEE YVDMWANQDE
401: LITMHEKASP MFRYELSRIS ASVFIALGKG RIQCPSDTRS QLFHGWFRPM LMDFGWLQRC SKGLDVRVLE ENLGQALLTL PLHQQQSLFV EWFQCFASRG
501: TECPNLSRAF QVWWRRSFVR SSVEVRQ

Best Arabidopsis Sequence Match ( AT2G13690.1 )
(BLAST)

001: MTMGDSDLRK PTNFGTGHLS RRRSWCCSFA VPPASPDTRS ISSRNHIPAK SQQQRPKLVP CSPQSSKSAL NIVNRIDPRR ILSPGRVSPI DSDPTVTTMQ
101: ETETTQEEED DAVVVDSTPN LRSESFRAPK IEVTGSGLSE GYDARLSLKG RNGGGVLVLE LSLEVLAANS DVFSGLIAEE KKCSSSSSSL GLKNTCRIEV
201: CDVENLGVFR ETVELMFEES NVIIKKFMTM GVYRAIDVLE VAAGIKFSRA VLSCLKYLEA VPWTEDEEEK LRRLLGIYSF DDDAVSEILA RFNSNETENL
301: QDSLSKKLVW SITSCSDVNP RNELKSLVKG LLCKSSVYEK EQPEINKEDI YRAGKCCVDS LAKLFEEGSS SSSSKKEKPL IESISREVEN INWLLEIMID
401: REIAEEFVEI WGKQRRLVEM HERVSPMVRY EVSRVTGAIF IAMGKRRVQC GGEARAGLVE AWFKPMLVDF GWLQRCKKGL DMREVEEGMG QTLLTLPVKE
501: QYQVFMEWFR WFSKHGTECP NLSKAFQIWW RRSFLRGVES STCR

Arabidopsis Description

PRL1-IFGBTB/POZ domain-containing protein At2g13690 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKH2]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.