CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013383_P001	Maize	mitochondrion, plastid	91.42	91.42
TraesCS4A01G260100.1	Wheat	mitochondrion	79.29	80.13
TraesCS4B01G054500.1	Wheat	mitochondrion	79.29	79.62
TraesCS4D01G054600.1	Wheat	mitochondrion	78.45	79.11
Os03t0723600-01	Rice	mitochondrion	76.36	76.36
GSMUA_Achr6P24460_001	Banana	cytosol	21.13	64.33
Solyc01g109600.2.1	Tomato	cytosol	19.25	59.35
GSMUA_Achr3P26130_001	Banana	mitochondrion	53.14	53.59
PGSC0003DMT400001872	Potato	plastid	50.0	47.33
VIT_03s0063g02520.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	47.91	46.93
KRH24478	Soybean	mitochondrion	47.07	46.39
KRH29466	Soybean	plastid	47.28	45.84
KXG37471	Sorghum	cytosol	21.55	19.58
OQU85769	Sorghum	mitochondrion	5.65	18.88
KXG34316	Sorghum	cytosol	21.34	18.78
OQU79497	Sorghum	mitochondrion	21.34	17.47
KXG26972	Sorghum	plastid	21.97	17.3
OQU90655	Sorghum	mitochondrion	18.41	16.7
EES15778	Sorghum	plastid	17.36	16.02
KXG34836	Sorghum	mitochondrion, plastid	18.83	15.38

Protein Annotations

EnsemblPlants:EER93543	EnsemblPlantsGene:SORBI_3001G108900	EntrezGene:8059980	InterPro:BTB/POZ_dom_prot	PANTHER:PTHR31060	PANTHER:PTHR31060:SF6
ProteinID:EER93543	ProteinID:EER93543.1	RefSeq:XP_002466545.1	SEG:seg	unigene:Sbi.2316	UniParc:UPI0001A827DA
UniProt:C5WM43	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:8442944..8447886

Molecular Weight (calculated)

52497.3 Da

IEP (calculated)

6.505

GRAVY (calculated)

0.040

Length

478 amino acids

Sequence
(BLAST)

001: MSLRKRQRSA SSSRLAAFCS PPSPPLPSSI STSPDSLTFP NADVFLRLHL DPSSPDDVDA TPDTDCHLSA ASSGTFLDLQ VSSASLLRSR YFAALLSDRW
101: PTAASGRLSL AVVAPPSCPR PFDAHIQVLR LLHTLDFAGA IRSPGDALDL LPVALLLLFD ACVEACIRFL EAVPWSEEEE ARVIDLARLL PADEAADLLA
201: RVSPPPVAAG PSSASGVNVR SPSEAMLHGL IHSAIHGHPV HAATKAFVAM LLKDYPSRDC VHKVLNEAFQ SRLDTVKELM GKYASPDFRV AVDSDEREAI
301: QRLNLQSAVL NVKHLYWLIE RMVDLRVAHN AVMLWSDQAA LATDLQKLLN DADMWRNMTP GLPMLVTRCT LRLANSVITG ETLVPRQVRM MLVKSWLPVL
401: NVCRDIVQPM HFQKSTNCQE LEEAFLQIIS TLPVPEAQEL LQQCLGFSTR NVDDCPHLVA AFKTWFRRAG RAPLGGEY

Best Arabidopsis Sequence Match ( AT1G63850.1 )
(BLAST)

001: MDYSTATTTA GNGYSSPRDS SFPSSFTKFN SALTAGLLNP MSPPPPPAMH DKTRSSPTLF EMMASEADTI GKVPVQIHNG VLPSPSSSSS SSSAAATAAR
101: TTNVNHLVIS AQDKQALAMQ RISDLLVIRS PGNQFNDPNS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAMKLSDRWS KQQLPPSSSP YIVEISDCDD
201: VEVYIETLML MYCRDLRKKM MRHDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE EYRIASLLSE LHLENVGATE VLRRVSVEAS NGNNGSNGGS
301: NDEVLLNLLH IVLEGKDEKA RRDMKTLVSK MLRENSSGND LRKESLYLAC DGCLHKLKRQ FLQAAESDLE NVDQIARQAD NLHWILDILI DRQIAEDFIV
401: MWASLSELSE VHSKVPVVHR FEISRVTARI FVGIGKGQIL TPKEVRCLLL RNWLTPFYDD FGWMRRASKG LDRYLIEDGL SNTILTLPLA WQQEFFLAWF
501: DRFLNSNEDC PNIQRGFEVW WRRAFWRRKE QSQEPARLRV TASATENS

Arabidopsis Description

BTB/POZ domain-containing protein At1g63850 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.