CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29466	Soybean	plastid	92.78	91.28
Solyc01g109600.2.1	Tomato	cytosol	23.09	72.26
VIT_03s0063g02520.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	63.92	63.52
GSMUA_Achr6P24460_001	Banana	cytosol	20.41	63.06
PGSC0003DMT400001872	Potato	plastid	61.03	58.61
GSMUA_Achr3P26130_001	Banana	mitochondrion	50.1	51.27
TraesCS4A01G260100.1	Wheat	mitochondrion	47.01	48.2
TraesCS4B01G054500.1	Wheat	mitochondrion	46.8	47.69
TraesCS4D01G054600.1	Wheat	mitochondrion	46.6	47.68
EER93543	Sorghum	mitochondrion	46.39	47.07
Zm00001d013383_P001	Maize	mitochondrion, plastid	45.36	46.03
Os03t0723600-01	Rice	mitochondrion	44.95	45.61
KRH08332	Soybean	cytosol	15.88	23.91
KRH69973	Soybean	cytosol	12.58	22.02
KRH41224	Soybean	mitochondrion	21.65	19.52
KRH28572	Soybean	cytosol	20.62	19.42
KRH76896	Soybean	cytosol	20.62	19.16
KRH59948	Soybean	cytosol, plastid	22.06	18.97
KRH59568	Soybean	mitochondrion, plastid	19.18	18.13
KRH53894	Soybean	plastid	18.56	17.89
KRG88696	Soybean	plastid	18.14	17.81
KRH24978	Soybean	plastid	18.14	17.5
KRH64045	Soybean	plastid	18.14	17.22
KRH08334	Soybean	cytosol	5.57	12.22
KRH69974	Soybean	cytosol	5.57	12.16

Protein Annotations

EMBL:ACUP02007176	EnsemblPlants:KRH24478	EnsemblPlantsGene:GLYMA_12G043500	EntrezGene:102662806	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom_prot
PANTHER:PTHR31060	PANTHER:PTHR31060:SF6	ProteinID:KRH24478	ProteinID:KRH24478.1	SEG:seg	UniParc:UPI00023D0B75
UniProt:I1LQ41	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:3148801..3150720

Molecular Weight (calculated)

54284.7 Da

IEP (calculated)

6.786

GRAVY (calculated)

-0.155

Length

485 amino acids

Sequence
(BLAST)

001: MFPKKRQRTT AACRSSSTLA TISSLSDVTL TEISHNPRPS SPMPDDRPSP AAEDALHYND AATADVVLRL FIDASSPLYS ATADSVSNSD LHVYLHSDVL
101: RRSKYFSALL SDRWIGHVHS PEHSSSSNRD LFRLNLGVAP AAGSIQLHLI VLELLYTNDF AAAVDSASTA LDLLPVALEL LFEECVRWCV DFLEAVPWTE
201: EEEKRVVRLI PFLSEKESKE LVARVWPSGE DSCEAMLQGL ISSAMNSYGN TAFVKAFVGK ILRDLSSRET AKRVLEKAFR KSLKTVKESL EDYSSPVFRG
301: DQNETEAIQR LNLHKASTNG KHLLWLVERM IELRVADVAV REWSEQAGFT ADLQRAFGDD AWRNIVPGLP AVILRCTCRL ANAVSAGTIL ASRQVRRKLV
401: QDWLPVLLVC KDNVSPSNKS LHLELEQTFL RIISTLPMSD AQELLQRCLS FSTRNVEDCP HLVTAFNTWF RRAARPLKPY SLFDQ

Best Arabidopsis Sequence Match ( AT1G63850.1 )
(BLAST)

001: MDYSTATTTA GNGYSSPRDS SFPSSFTKFN SALTAGLLNP MSPPPPPAMH DKTRSSPTLF EMMASEADTI GKVPVQIHNG VLPSPSSSSS SSSAAATAAR
101: TTNVNHLVIS AQDKQALAMQ RISDLLVIRS PGNQFNDPNS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAMKLSDRWS KQQLPPSSSP YIVEISDCDD
201: VEVYIETLML MYCRDLRKKM MRHDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE EYRIASLLSE LHLENVGATE VLRRVSVEAS NGNNGSNGGS
301: NDEVLLNLLH IVLEGKDEKA RRDMKTLVSK MLRENSSGND LRKESLYLAC DGCLHKLKRQ FLQAAESDLE NVDQIARQAD NLHWILDILI DRQIAEDFIV
401: MWASLSELSE VHSKVPVVHR FEISRVTARI FVGIGKGQIL TPKEVRCLLL RNWLTPFYDD FGWMRRASKG LDRYLIEDGL SNTILTLPLA WQQEFFLAWF
501: DRFLNSNEDC PNIQRGFEVW WRRAFWRRKE QSQEPARLRV TASATENS

Arabidopsis Description

BTB/POZ domain-containing protein At1g63850 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.