Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g109600.2.1 | Tomato | cytosol | 22.54 | 70.97 |
| PGSC0003DMT400001872 | Potato | plastid | 68.24 | 65.94 |
| KRH24478 | Soybean | mitochondrion | 63.52 | 63.92 |
| KRH29466 | Soybean | plastid | 64.34 | 63.69 |
| GSMUA_Achr6P24460_001 | Banana | cytosol | 20.08 | 62.42 |
| GSMUA_Achr3P26130_001 | Banana | mitochondrion | 52.87 | 54.43 |
| TraesCS4D01G054600.1 | Wheat | mitochondrion | 48.36 | 49.79 |
| TraesCS4A01G260100.1 | Wheat | mitochondrion | 48.16 | 49.68 |
| TraesCS4B01G054500.1 | Wheat | mitochondrion | 48.16 | 49.37 |
| EER93543 | Sorghum | mitochondrion | 46.93 | 47.91 |
| Os03t0723600-01 | Rice | mitochondrion | 46.72 | 47.7 |
| Zm00001d013383_P001 | Maize | mitochondrion, plastid | 45.9 | 46.86 |
| VIT_04s0023g01000.t01 | Wine grape | cytosol | 22.13 | 20.61 |
| VIT_06s0004g03710.t01 | Wine grape | plastid | 19.47 | 19.59 |
| VIT_04s0044g01240.t01 | Wine grape | nucleus | 19.06 | 16.88 |
| VIT_02s0025g00150.t01 | Wine grape | plastid | 22.54 | 16.49 |
Protein Annotations
| ArrayExpress:VIT_03s0063g02520 | EMBL:FN596006 | EnsemblPlants:VIT_03s0063g02520.t01 | EnsemblPlantsGene:VIT_03s0063g02520 | EntrezGene:100853383 | EntrezGene:LOC100853383 |
| Gene3D:3.30.710.10 | InterPro:BTB/POZ_dom_prot | PANTHER:PTHR31060 | PANTHER:PTHR31060:SF6 | ProteinID:CCB56979 | ProteinID:CCB56979.1 |
| RefSeq:XP_003631650 | RefSeq:XP_003631650.1 | SEG:seg | TIGR:TC53459 | TIGR:TC54431 | unigene:Vvi.6963 |
| UniParc:UPI00015C829D | UniProt:F6HQM2 | wikigene:100853383 | wikigene:LOC100853383 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr3:+:5760115..5767477
Molecular Weight (calculated)
54181.5 Da
IEP (calculated)
5.665
GRAVY (calculated)
-0.124
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAGSGGGGI KKRQRIGCNS RLSSTGAVID SCCLEGTVTE ASHKPSGPRR TSSSATISGG FNDSASSDVV LRLFLEPCPS DSDSESISTV DSFVQDDLQI
101: YLHSDVIRRS KYFSALLSDR WQGDSGDGDD SPKIYRLNFG VPASTGTIDT HLTVLQLLYT NDFSGVIESA STALSILPVA LELLFEDCVR SCVRFLEAVP
201: WTEEEEKRVL SLIPLLREEE SRELLDRVSP AKTDSLEEML YGLIVAAIHN HSNMAFVKAF VAKLLREFSS GDSARRVLDR AFEASLKTVK RSLEEYSSPD
301: FRGDHNETEA IQRLNLHTAM TNGRHLLWLI ERMIELKVAD KAVREWSEQS TFTADLQRAF RDDAWRNIVP GLPVVVLRCT CKLANAVASG SILAARPVRM
401: KLVKEWLPVL IVCKDNVSVL HTHKSLYTEL EEIFLRIIST FPLSDAQELL QQCLSFATRN VDDCPHLVTA FNTWFCRAAR PPQADSLC
101: YLHSDVIRRS KYFSALLSDR WQGDSGDGDD SPKIYRLNFG VPASTGTIDT HLTVLQLLYT NDFSGVIESA STALSILPVA LELLFEDCVR SCVRFLEAVP
201: WTEEEEKRVL SLIPLLREEE SRELLDRVSP AKTDSLEEML YGLIVAAIHN HSNMAFVKAF VAKLLREFSS GDSARRVLDR AFEASLKTVK RSLEEYSSPD
301: FRGDHNETEA IQRLNLHTAM TNGRHLLWLI ERMIELKVAD KAVREWSEQS TFTADLQRAF RDDAWRNIVP GLPVVVLRCT CKLANAVASG SILAARPVRM
401: KLVKEWLPVL IVCKDNVSVL HTHKSLYTEL EEIFLRIIST FPLSDAQELL QQCLSFATRN VDDCPHLVTA FNTWFCRAAR PPQADSLC
001: MDYSTATTTA GNGYSSPRDS SFPSSFTKFN SALTAGLLNP MSPPPPPAMH DKTRSSPTLF EMMASEADTI GKVPVQIHNG VLPSPSSSSS SSSAAATAAR
101: TTNVNHLVIS AQDKQALAMQ RISDLLVIRS PGNQFNDPNS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAMKLSDRWS KQQLPPSSSP YIVEISDCDD
201: VEVYIETLML MYCRDLRKKM MRHDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE EYRIASLLSE LHLENVGATE VLRRVSVEAS NGNNGSNGGS
301: NDEVLLNLLH IVLEGKDEKA RRDMKTLVSK MLRENSSGND LRKESLYLAC DGCLHKLKRQ FLQAAESDLE NVDQIARQAD NLHWILDILI DRQIAEDFIV
401: MWASLSELSE VHSKVPVVHR FEISRVTARI FVGIGKGQIL TPKEVRCLLL RNWLTPFYDD FGWMRRASKG LDRYLIEDGL SNTILTLPLA WQQEFFLAWF
501: DRFLNSNEDC PNIQRGFEVW WRRAFWRRKE QSQEPARLRV TASATENS
101: TTNVNHLVIS AQDKQALAMQ RISDLLVIRS PGNQFNDPNS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAMKLSDRWS KQQLPPSSSP YIVEISDCDD
201: VEVYIETLML MYCRDLRKKM MRHDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE EYRIASLLSE LHLENVGATE VLRRVSVEAS NGNNGSNGGS
301: NDEVLLNLLH IVLEGKDEKA RRDMKTLVSK MLRENSSGND LRKESLYLAC DGCLHKLKRQ FLQAAESDLE NVDQIARQAD NLHWILDILI DRQIAEDFIV
401: MWASLSELSE VHSKVPVVHR FEISRVTARI FVGIGKGQIL TPKEVRCLLL RNWLTPFYDD FGWMRRASKG LDRYLIEDGL SNTILTLPLA WQQEFFLAWF
501: DRFLNSNEDC PNIQRGFEVW WRRAFWRRKE QSQEPARLRV TASATENS
Arabidopsis Description
BTB/POZ domain-containing protein At1g63850 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.