Factsheet for GSMUA_Achr3P26130_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P24460_001	Banana	cytosol	24.05	72.61
Solyc01g109600.2.1	Tomato	cytosol	20.68	63.23
TraesCS4A01G260100.1	Wheat	mitochondrion	56.96	57.08
TraesCS4D01G054600.1	Wheat	mitochondrion	56.96	56.96
TraesCS4B01G054500.1	Wheat	mitochondrion	56.75	56.51
Os03t0723600-01	Rice	mitochondrion	54.43	53.97
EER93543	Sorghum	mitochondrion	53.59	53.14
VIT_03s0063g02520.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	54.43	52.87
Zm00001d013383_P001	Maize	mitochondrion, plastid	52.53	52.09
KRH29466	Soybean	plastid	52.32	50.3
KRH24478	Soybean	mitochondrion	51.27	50.1
PGSC0003DMT400001872	Potato	plastid	52.74	49.51
GSMUA_Achr7P08160_001	Banana	cytosol	17.51	21.96
GSMUA_Achr1P03700_001	Banana	plastid	23.42	21.31
GSMUA_Achr4P24950_001	Banana	plastid	22.36	20.95
GSMUA_Achr5P10260_001	Banana	plastid	23.21	19.96
GSMUA_Achr2P17200_001	Banana	cytosol	20.68	19.33
GSMUA_Achr9P28400_001	Banana	cytosol	20.46	18.95
GSMUA_Achr4P30630_001	Banana	cytosol	20.04	18.55
GSMUA_Achr6P34610_001	Banana	cytosol	20.04	17.66
GSMUA_Achr7P03070_001	Banana	mitochondrion	19.2	17.43
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	19.2	17.3
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	18.14	16.63
GSMUA_Achr4P28120_001	Banana	cytosol	18.35	13.36

Protein Annotations

EnsemblPlants:GSMUA_Achr3P26130_001	EnsemblPlants:GSMUA_Achr3T26130_001	EnsemblPlantsGene:GSMUA_Achr3G26130_001	InterPro:BTB/POZ_dom_prot	PANTHER:PTHR31060	PANTHER:PTHR31060:SF6
UniParc:UPI0002951A4D	UniProt:M0SHX9	MapMan:35.1	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G26130_001]

Coordinates

chr3:+:26087019..26090349

Molecular Weight (calculated)

53683.0 Da

IEP (calculated)

6.006

GRAVY (calculated)

-0.249

Length

474 amino acids

Sequence
(BLAST)

001: MSLRKRQRVG SSGHLSSLDG ALAEERSSPS PFRCPAFDPG GFNDPSFSDV LLHLQFDPDH DPHPDAYLTC LDLHVQSAAL RRSDYFAALL SDRWQRPSAS
101: SGDAIPLRVT LKIPRDDDRH RQGPFDAHVA VIRLLHTLDF SGAVASVTDA LEMMPVALEF LFEDCVRACV RFLEAMPWTE EEEERVLTLI PFLGEEESRE
201: LVARVSPVVA ASGDWKSMSE EMLHGLIDVA IRRHPNVATV KAFVAKILKD FPYRESVQRV LDQAFLSSLE TVKDYLGKYA SPDVRVAEDS DEREAIQRLN
301: LHAVMSNLKH LHWLVERIIE VRVADTAVRE WSEQEALAAD LMKTFRDDTW KNIAPGLPLL VTRCSYRLAD AVASGATLAP RQVRMKIVRN WLPVLNVLRD
401: TFSPLPSGYR TLYPDLEETF LKIISTLPLS DAQELLQQCL SFSTRNLDDC PHLTSAFKTW FRRANRPPHD YRTN

Best Arabidopsis Sequence Match ( AT1G63850.1 )
(BLAST)

001: MDYSTATTTA GNGYSSPRDS SFPSSFTKFN SALTAGLLNP MSPPPPPAMH DKTRSSPTLF EMMASEADTI GKVPVQIHNG VLPSPSSSSS SSSAAATAAR
101: TTNVNHLVIS AQDKQALAMQ RISDLLVIRS PGNQFNDPNS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAMKLSDRWS KQQLPPSSSP YIVEISDCDD
201: VEVYIETLML MYCRDLRKKM MRHDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE EYRIASLLSE LHLENVGATE VLRRVSVEAS NGNNGSNGGS
301: NDEVLLNLLH IVLEGKDEKA RRDMKTLVSK MLRENSSGND LRKESLYLAC DGCLHKLKRQ FLQAAESDLE NVDQIARQAD NLHWILDILI DRQIAEDFIV
401: MWASLSELSE VHSKVPVVHR FEISRVTARI FVGIGKGQIL TPKEVRCLLL RNWLTPFYDD FGWMRRASKG LDRYLIEDGL SNTILTLPLA WQQEFFLAWF
501: DRFLNSNEDC PNIQRGFEVW WRRAFWRRKE QSQEPARLRV TASATENS

Arabidopsis Description

BTB/POZ domain-containing protein At1g63850 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.