Factsheet for GSMUA_Achr9P26390_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

plastid 1
peroxisome 1
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P08160_001	Banana	cytosol	54.94	76.45
GSMUA_Achr2P17200_001	Banana	cytosol	72.62	75.35
Os03t0769400-01	Rice	cytosol	67.49	68.01
GSMUA_Achr6P34610_001	Banana	cytosol	69.01	67.47
KXG37471	Sorghum	cytosol	67.11	67.11
TraesCS5A01G404600.1	Wheat	cytosol	66.54	66.67
TraesCS5D01G414700.1	Wheat	cytosol	66.35	66.6
TraesCS5B01G409500.1	Wheat	cytosol	65.78	66.03
Os07t0123500-01	Rice	cytosol	65.97	65.84
HORVU5Hr1G098300.1	Barley	cytosol	65.21	65.58
KRH69973	Soybean	cytosol	34.41	65.34
VIT_04s0023g01000.t01	Wine grape	cytosol	64.26	64.5
Zm00001d034194_P002	Maize	cytosol	64.64	63.67
KRH08332	Soybean	cytosol	38.78	63.35
Bra041065.1-P	Field mustard	cytosol	26.62	63.35
KXG34316	Sorghum	cytosol	64.64	62.62
CDX73793	Canola	mitochondrion	9.51	61.73
Bra041074.1-P	Field mustard	mitochondrion	9.32	60.49
PGSC0003DMT400026018	Potato	cytosol	61.41	60.26
Zm00001d007975_P001	Maize	cytosol	61.98	59.82
Solyc02g089950.1.1	Tomato	cytosol	61.41	58.62
KRH28572	Soybean	cytosol	57.22	58.45
KRH76896	Soybean	cytosol	57.41	57.85
CDX77940	Canola	mitochondrion	27.95	57.65
AT3G50780.1	Thale cress	cytosol	55.32	55.96
CDX77942	Canola	mitochondrion	29.09	55.84
CDX77944	Canola	cytosol	53.8	55.27
GSMUA_Achr4P28120_001	Banana	cytosol	64.64	52.23
KRH08334	Soybean	cytosol	19.39	46.15
KRH69974	Soybean	cytosol	19.39	45.95
Zm00001d020128_P001	Maize	mitochondrion	26.62	45.75
GSMUA_Achr1P03700_001	Banana	plastid	34.41	34.74
GSMUA_Achr5P10260_001	Banana	plastid	35.36	33.76
GSMUA_Achr4P24950_001	Banana	plastid	32.13	33.4
GSMUA_Achr9P28400_001	Banana	cytosol	31.18	32.03
GSMUA_Achr4P30630_001	Banana	cytosol	31.18	32.03
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	28.71	29.21
GSMUA_Achr7P03070_001	Banana	mitochondrion	28.14	28.35
GSMUA_Achr6P24460_001	Banana	cytosol	7.41	24.84
GSMUA_Achr3P26130_001	Banana	mitochondrion	17.3	19.2

Protein Annotations

EnsemblPlants:GSMUA_Achr9P26390_001	EnsemblPlants:GSMUA_Achr9T26390_001	EnsemblPlantsGene:GSMUA_Achr9G26390_001	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR31060
PANTHER:PTHR31060:SF28	PFAM:PF00651	PFscan:PS50097	SUPFAM:SSF54695	UniParc:UPI00029679FD	UniProt:M0U3P6
MapMan:35.1	:	:	:	:	:

Description

H-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G26390_001]

Coordinates

chr9:-:30832196..30834478

Molecular Weight (calculated)

59398.3 Da

IEP (calculated)

7.450

GRAVY (calculated)

-0.323

Length

526 amino acids

Sequence
(BLAST)

001: MAEFTLRRLE QGHTRIRNVP IAVTPEGFWC CPSPAAIQKT LKNQNLQDRH RATSPLHSKA SSLQRPSLPP VDKRSVSTSL RSRLISDEQR CPNSSTATPV
101: SSKAPERPQK LNVESQQRKI SVGFGQLETS DLKVTLHGKG GTSVRMSVHK NILAENSSFF ADKLSGLSVP QIEMADCEDV EIFVETVGLM YCKDIKHRLI
201: KQSVSRVLRI LKVAETLGFQ ACIKSCLDYL EAAPWIGEEE DDVVSSVRRL QDDNYGISPI LNRVASDLSN QPNDTLSHIM ELVLESTEDR GRREMKSLVL
301: KLLKEINLKT NGTVEICTES LYSSCQRCLE SLLNLFRQAS EPGFSDRSLE SKDPVVRQIT LEADNLIWLL EILVDRNAAD EFTLMWASQN ELAELHTKVP
401: TMSRHLVSCI TCRLFVGIGN GEMLPSKETR KLLLHVWLQP LINDYSWLQH GSRSFDRKVV EEGIGRTILT LSLEDQQSIL LSWLGCFLKA SDNCPNLQRA
501: FEVWWRRTFI RPYVEQHGSD LQSGKA

Best Arabidopsis Sequence Match ( AT3G50780.2 )
(BLAST)

001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE

Arabidopsis Description

BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.