Factsheet for GSMUA_Achr4P30630_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 5
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P28400_001	Banana	cytosol	75.59	75.59
VIT_06s0004g03710.t01	Wine grape	plastid	54.69	57.73
Solyc11g072900.1.1	Tomato	cytosol	29.49	56.77
Solyc11g072720.1.1	Tomato	plastid	54.88	56.43
PGSC0003DMT400065249	Potato	plastid	53.91	55.65
KRG88696	Soybean	plastid	51.37	53.24
KRH24978	Soybean	plastid	51.76	52.68
CDY09229	Canola	plastid	50.98	52.52
Bra020266.1-P	Field mustard	plastid	50.59	52.32
AT5G60050.1	Thale cress	cytosol, plastid	50.59	51.9
GSMUA_Achr1P03700_001	Banana	plastid	42.77	42.03
GSMUA_Achr7P08160_001	Banana	cytosol	29.69	40.21
GSMUA_Achr5P10260_001	Banana	plastid	42.58	39.56
GSMUA_Achr4P24950_001	Banana	plastid	39.06	39.53
GSMUA_Achr2P17200_001	Banana	cytosol	32.81	33.14
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	32.03	31.18
GSMUA_Achr6P34610_001	Banana	cytosol	31.64	30.11
GSMUA_Achr6P24460_001	Banana	cytosol	7.81	25.48
GSMUA_Achr7P03070_001	Banana	mitochondrion	25.78	25.29
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	25.2	24.95
GSMUA_Achr4P28120_001	Banana	cytosol	29.1	22.89
GSMUA_Achr3P26130_001	Banana	mitochondrion	18.55	20.04

Protein Annotations

EnsemblPlants:GSMUA_Achr4P30630_001	EnsemblPlants:GSMUA_Achr4T30630_001	EnsemblPlantsGene:GSMUA_Achr4G30630_001	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	PANTHER:PTHR31060	PANTHER:PTHR31060:SF12
PFscan:PS50097	SEG:seg	UniParc:UPI0002960FA6	UniProt:M0STH5	MapMan:35.1	:

Description

Putative H-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G30630_001]

Coordinates

chr4:-:28141637..28144338

Molecular Weight (calculated)

57228.7 Da

IEP (calculated)

5.300

GRAVY (calculated)

-0.222

Length

512 amino acids

Sequence
(BLAST)

001: MAAVAENLLK SGEVSAMIRQ GFISSPGLSP TSSPPPASLS PASPSPPRPS FPSPKTSTLF EMMSQEGVPH RTYPPPRQPS GDQNRLRLQE KIAAILAREG
101: PGDMELSVSS SDGFRVTVTA HRRVLAARSR FFAEKLAGVG GRPGRPVAVE ICECDDAEAY VEAVGLMYSG DPRRSLAGED VDKVLGLLKV SVDIQFDDGI
201: LACLDYLEAI PWSEAEEEKV VSTLGKLQIQ QVCEPIRGIL QRVSVEPSTS ANTDSIYLGI LDGVLQAKDK KARRDMKALI ARLLREDLDQ NNMHYNKLEI
301: SRETLYHLCH KCLDCLLQLL SEAANFGEGH GDRASLMGEV AREADNVQWL VDILINKRIA DEFVALWADQ SELSTWHSKI PCMYRFEISR ITAQLCIAIG
401: RGQILVTKDA KISLLRTWLE ALYEDFSWMK RACRMFDKKL IEDGLSATIL TLPMAEQQEI LLRWFDCFLS KGDNCPNIQR AFEVWWRRAF FRQFTGDQDH
501: LQPQIVVSDE QT

Best Arabidopsis Sequence Match ( AT5G60050.1 )
(BLAST)

001: MASREVSTMI KQGFIADPSL SFSPSRISSP IKLSTASPPL PPPPPPPPNE STLSNPTLFD MMSDEHNREL PRRKSHARVA QILTEFKNGV VYGHSLGPGD
101: VKLTVVGKDG YRVTMDVHRK VLSEKSRFFM EKMNSRREKG VSHMVEISEC DDLEIYVETV VLMYSDDLKK KLIGENVIKI LALLKVSAAI SFDEGVMSCL
201: EHLEAVPWSE DEEETVVTCL EELHLPDDSV TLILQRVSSQ PSTSSTRTRT DDIFSKLLTG VLQAKDDKAR REMKVLIFKL VREEADYDVS RDTLYGLCHR
301: CLTSLVLCLS EVTTQMNDPG KDRGALMGEI AREADNMLWM VDILIEKKLC SEFVKLWADQ KELANLHSKI PTMYRHEISK ITAQICVGIG KGRILVNRET
401: RFAVLNTWLE ALYDDFGWMR RLSSRSLDRK LVEDGLSQTI LTLSLRQQQV ILMKWFDRFL SKGDDCPNVQ RAFEVWWRRA FIRQVLTEPD EPRLQITLY

Arabidopsis Description

BTB/POZ domain-containing protein At5g60050 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVG9]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.