Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g072720.1.1 | Tomato | plastid | 90.23 | 48.19 |
| PGSC0003DMT400065249 | Potato | plastid | 89.85 | 48.19 |
| VIT_06s0004g03710.t01 | Wine grape | plastid | 67.29 | 36.91 |
| KRG88696 | Soybean | plastid | 61.28 | 33.0 |
| CDY09229 | Canola | plastid | 60.53 | 32.39 |
| Bra020266.1-P | Field mustard | plastid | 59.77 | 32.12 |
| KRH24978 | Soybean | plastid | 60.53 | 32.01 |
| AT5G60050.1 | Thale cress | cytosol, plastid | 58.27 | 31.06 |
| GSMUA_Achr4P30630_001 | Banana | cytosol | 56.77 | 29.49 |
| GSMUA_Achr9P28400_001 | Banana | cytosol | 54.14 | 28.12 |
| Solyc01g109600.2.1 | Tomato | cytosol | 13.53 | 23.23 |
| Solyc08g081380.2.1 | Tomato | plastid | 44.36 | 18.5 |
| Solyc02g089950.1.1 | Tomato | cytosol | 37.59 | 18.15 |
| Solyc11g005950.1.1 | Tomato | cytosol, plastid | 31.2 | 15.26 |
Protein Annotations
| EnsemblPlants:Solyc11g072900.1.1 | EnsemblPlantsGene:Solyc11g072900.1 | InterPro:BTB/POZ_dom_prot | PANTHER:PTHR31060 | PANTHER:PTHR31060:SF12 | SEG:seg |
| UniParc:UPI0002769E51 | UniProt:K4DAZ6 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr11:-:56069542..56070422
Molecular Weight (calculated)
30949.4 Da
IEP (calculated)
5.832
GRAVY (calculated)
-0.223
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKDVKDRLT ELVSQTFYIY IYILQRLVAE PSTSSRSDNI LQRLLTGVLH AKDDNARKEM KKVISSLCLT SLILSLFEAT SVDDNRQQDQ GVLMGEIARE
101: ADNLQWLVDI LIDRKMGDEF VKLWAEQKEL SILHSKILTM YRHEISKITA QLCIAIGRGN LLVPKDVRYC LLSTWLESLY DDFGWMKRAG KSIDKKLVEE
201: GLGQTILTLP LAQQQTILLN WFDRFLNKGD DYPNIQRAFE VWWRRSFVKQ YTADSQLQLA IFDYTE
101: ADNLQWLVDI LIDRKMGDEF VKLWAEQKEL SILHSKILTM YRHEISKITA QLCIAIGRGN LLVPKDVRYC LLSTWLESLY DDFGWMKRAG KSIDKKLVEE
201: GLGQTILTLP LAQQQTILLN WFDRFLNKGD DYPNIQRAFE VWWRRSFVKQ YTADSQLQLA IFDYTE
001: MASREVSTMI KQGFIADPSL SFSPSRISSP IKLSTASPPL PPPPPPPPNE STLSNPTLFD MMSDEHNREL PRRKSHARVA QILTEFKNGV VYGHSLGPGD
101: VKLTVVGKDG YRVTMDVHRK VLSEKSRFFM EKMNSRREKG VSHMVEISEC DDLEIYVETV VLMYSDDLKK KLIGENVIKI LALLKVSAAI SFDEGVMSCL
201: EHLEAVPWSE DEEETVVTCL EELHLPDDSV TLILQRVSSQ PSTSSTRTRT DDIFSKLLTG VLQAKDDKAR REMKVLIFKL VREEADYDVS RDTLYGLCHR
301: CLTSLVLCLS EVTTQMNDPG KDRGALMGEI AREADNMLWM VDILIEKKLC SEFVKLWADQ KELANLHSKI PTMYRHEISK ITAQICVGIG KGRILVNRET
401: RFAVLNTWLE ALYDDFGWMR RLSSRSLDRK LVEDGLSQTI LTLSLRQQQV ILMKWFDRFL SKGDDCPNVQ RAFEVWWRRA FIRQVLTEPD EPRLQITLY
101: VKLTVVGKDG YRVTMDVHRK VLSEKSRFFM EKMNSRREKG VSHMVEISEC DDLEIYVETV VLMYSDDLKK KLIGENVIKI LALLKVSAAI SFDEGVMSCL
201: EHLEAVPWSE DEEETVVTCL EELHLPDDSV TLILQRVSSQ PSTSSTRTRT DDIFSKLLTG VLQAKDDKAR REMKVLIFKL VREEADYDVS RDTLYGLCHR
301: CLTSLVLCLS EVTTQMNDPG KDRGALMGEI AREADNMLWM VDILIEKKLC SEFVKLWADQ KELANLHSKI PTMYRHEISK ITAQICVGIG KGRILVNRET
401: RFAVLNTWLE ALYDDFGWMR RLSSRSLDRK LVEDGLSQTI LTLSLRQQQV ILMKWFDRFL SKGDDCPNVQ RAFEVWWRRA FIRQVLTEPD EPRLQITLY
Arabidopsis Description
BTB/POZ domain-containing protein At5g60050 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVG9]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.