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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
  • nucleus 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400012106 Potato plastid 97.96 97.05
PGSC0003DMT400032124 Potato plastid 97.65 97.04
KRH41224 Soybean mitochondrion 64.42 76.39
KRH59948 Soybean cytosol, plastid 63.48 71.81
VIT_02s0025g00150.t01 Wine grape plastid 72.26 69.12
GSMUA_Achr1P03700_001 Banana plastid 54.55 66.79
Os04t0579700-01 Rice cytosol 55.49 66.42
AT1G63850.1 Thale cress cytosol 56.11 65.33
CDY08328 Canola cytosol, plastid 54.23 65.04
Bra027781.1-P Field mustard plastid 54.23 64.79
GSMUA_Achr5P10260_001 Banana plastid 55.96 64.79
CDY38217 Canola plastid 53.92 64.54
HORVU0Hr1G005290.1 Barley cytosol 47.18 63.5
GSMUA_Achr4P24950_001 Banana plastid 50.0 63.04
KXG26972 Sorghum plastid 57.84 60.79
Zm00001d026051_P002 Maize cytosol, mitochondrion, plastid 57.68 60.73
TraesCS2B01G413600.1 Wheat cytosol, plastid 57.21 59.54
HORVU2Hr1G094080.1 Barley cytosol 57.05 56.35
Solyc11g072720.1.1 Tomato plastid 36.52 46.79
Solyc11g072900.1.1 Tomato cytosol 18.5 44.36
Solyc02g089950.1.1 Tomato cytosol 31.82 36.84
Solyc11g005950.1.1 Tomato cytosol, plastid 23.51 27.57
Solyc01g109600.2.1 Tomato cytosol 4.55 18.71
Protein Annotations
EnsemblPlants:Solyc08g081380.2.1EnsemblPlantsGene:Solyc08g081380.2Gene3D:3.30.710.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:BTB/POZ_domInterPro:BTB/POZ_dom_protInterPro:IPR000210PANTHER:PTHR31060PANTHER:PTHR31060:SF3PFscan:PS50097
SEG:segUniParc:UPI000276C0CBUniProt:K4CPD5MapMan:35.1::
Description
No Description!
Coordinates
chr8:+:64447291..64450090
Molecular Weight (calculated)
71087.9 Da
IEP (calculated)
7.899
GRAVY (calculated)
-0.379
Length
638 amino acids
Sequence
(BLAST)
001: MAASAATTTT STNLKFQIQP IKPKRRRCRE TTITASTNPS QYSPTNCSTQ CLNQTRKVDT PTIVSPDNSW CCPASKSPSP SPTQPISSCS SSISDNTKIR
101: YSPTTFPRVM ESIGTLYGGG GGGGGTPIPN NNTHEGFPSS FSKFNSALTA GLLNPMSPPP SMDKTRSSPT LFEMMANEPE CITRSTINGP ISNGCSNQKP
201: ASFVPLDKQA LMQQRLLDLL ACRSPGNQFN DSSSSDVKLT LSSKDGLSVA MNVHRQILVV HSRFFAVKLS EKWVKQQRNS GPYIVEIADC DDIEVYIETL
301: RLMYCKDLRK RLMKEDVPKV LGILKVSAAI GFDAGVLSCL EYLEAAPWAE DEEEKVASLL SELRLEGVGA GEVLRRVSLD VTSGTESGNG NEEVLLKLLH
401: VVLEGKDEKA RREMKGLVSK MLHENSSHND LRKESLYSAC NACLQLLRHH FLRAADADMM DVGQIARQAD NLHWILDILI DRQIAEDFLR TWASQSELSE
501: AHSKVPALHR YEVSRVTARL FVGIGKGQLL ASKDARCSLL QTWLVPFYED FGWMRRASRG LDRHLIEDGL SNTILTLPMA LQQDILMSWF DRFLNSGDDC
601: PNIQRGFEIW WRRSFWRRNG EPERPRQMRV MTATIENS
Best Arabidopsis Sequence Match ( AT1G63850.1 )
(BLAST)
001: MDYSTATTTA GNGYSSPRDS SFPSSFTKFN SALTAGLLNP MSPPPPPAMH DKTRSSPTLF EMMASEADTI GKVPVQIHNG VLPSPSSSSS SSSAAATAAR
101: TTNVNHLVIS AQDKQALAMQ RISDLLVIRS PGNQFNDPNS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAMKLSDRWS KQQLPPSSSP YIVEISDCDD
201: VEVYIETLML MYCRDLRKKM MRHDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE EYRIASLLSE LHLENVGATE VLRRVSVEAS NGNNGSNGGS
301: NDEVLLNLLH IVLEGKDEKA RRDMKTLVSK MLRENSSGND LRKESLYLAC DGCLHKLKRQ FLQAAESDLE NVDQIARQAD NLHWILDILI DRQIAEDFIV
401: MWASLSELSE VHSKVPVVHR FEISRVTARI FVGIGKGQIL TPKEVRCLLL RNWLTPFYDD FGWMRRASKG LDRYLIEDGL SNTILTLPLA WQQEFFLAWF
501: DRFLNSNEDC PNIQRGFEVW WRRAFWRRKE QSQEPARLRV TASATENS
Arabidopsis Description
BTB/POZ domain-containing protein At1g63850 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.