Factsheet for Bra027781.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38217	Canola	plastid	99.06	99.25
AT1G63850.1	Thale cress	cytosol	91.57	89.23
KRH41224	Soybean	mitochondrion	67.6	67.1
Os04t0579700-01	Rice	cytosol	63.48	63.6
GSMUA_Achr1P03700_001	Banana	plastid	61.8	63.34
KRH59948	Soybean	cytosol, plastid	66.1	62.59
GSMUA_Achr5P10260_001	Banana	plastid	63.3	61.34
GSMUA_Achr4P24950_001	Banana	plastid	57.12	60.28
HORVU0Hr1G005290.1	Barley	cytosol	52.62	59.28
VIT_02s0025g00150.t01	Wine grape	plastid	70.41	56.37
Zm00001d026051_P002	Maize	cytosol, mitochondrion, plastid	63.48	55.94
TraesCS2B01G413600.1	Wheat	cytosol, plastid	63.86	55.63
KXG26972	Sorghum	plastid	63.11	55.52
Solyc08g081380.2.1	Tomato	plastid	64.79	54.23
PGSC0003DMT400032124	Potato	plastid	64.61	53.74
PGSC0003DMT400012106	Potato	plastid	64.79	53.73
HORVU2Hr1G094080.1	Barley	cytosol	64.04	52.94
Bra041065.1-P	Field mustard	cytosol	18.35	44.34
Bra041074.1-P	Field mustard	mitochondrion	6.55	43.21
Bra020266.1-P	Field mustard	plastid	39.14	42.22

Protein Annotations

EnsemblPlants:Bra027781.1	EnsemblPlants:Bra027781.1-P	EnsemblPlantsGene:Bra027781	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR31060	PANTHER:PTHR31060:SF3	PFscan:PS50097	SEG:seg	SUPFAM:SSF54695	UniParc:UPI0002541A8C
UniProt:M4EG68	MapMan:35.1	:	:	:	:

Description

AT1G63850 (E=3e-254) | PRLI-interacting factor-related

Coordinates

chrA09:+:6230306..6231978

Molecular Weight (calculated)

60175.0 Da

IEP (calculated)

6.675

GRAVY (calculated)

-0.258

Length

534 amino acids

Sequence
(BLAST)

001: MDFSTTTTTT STAANGYSSP RDSSIPSSFT KFNSALTAGL LNPMSPPPPP PAMLDKSSRA SPTLFEMMSS EAGSPVQIQN LALPSSSRTR TTNGSHLVIS
101: AQDKQALAMQ RISNLLMTRS PGNQFNDPAS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAVKLSDRWS KQQQMAPSSS PYIVEISDCD DVEVYIETLM
201: LMYCRDLRKK MMRQDVSRVL GILKVSAAIG FDAGVLSCLE YLEAAPWSED EECRIASLLS ELHLENVGAT EVLRRVSVEA SHNNGSNDEV LLNLLHIVLE
301: GKDEKARRDM KTLVSKMLRE NSSGNDLRKE SLYLACDGCL HKLKRQFLQA AESDLENVDQ IARQADNLHW ILDILIDRQI AEDFLVMWAS LSELSDVHGK
401: VPVVHRFEIS RVTARIFVGI GKGQILTPKE VRCLLLRNWL TPFYDDFAWM KRASKGLDRY LVEDGLSNTI LTLPLAWQQE FFLAWFDRFL NSNDCPNIQR
501: GFEVWWRRAF WRRKEQSQEE PARLRIIASA TDNS

Best Arabidopsis Sequence Match ( AT1G63850.1 )
(BLAST)

001: MDYSTATTTA GNGYSSPRDS SFPSSFTKFN SALTAGLLNP MSPPPPPAMH DKTRSSPTLF EMMASEADTI GKVPVQIHNG VLPSPSSSSS SSSAAATAAR
101: TTNVNHLVIS AQDKQALAMQ RISDLLVIRS PGNQFNDPNS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAMKLSDRWS KQQLPPSSSP YIVEISDCDD
201: VEVYIETLML MYCRDLRKKM MRHDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE EYRIASLLSE LHLENVGATE VLRRVSVEAS NGNNGSNGGS
301: NDEVLLNLLH IVLEGKDEKA RRDMKTLVSK MLRENSSGND LRKESLYLAC DGCLHKLKRQ FLQAAESDLE NVDQIARQAD NLHWILDILI DRQIAEDFIV
401: MWASLSELSE VHSKVPVVHR FEISRVTARI FVGIGKGQIL TPKEVRCLLL RNWLTPFYDD FGWMRRASKG LDRYLIEDGL SNTILTLPLA WQQEFFLAWF
501: DRFLNSNEDC PNIQRGFEVW WRRAFWRRKE QSQEPARLRV TASATENS

Arabidopsis Description

BTB/POZ domain-containing protein At1g63850 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.