Factsheet for HORVU0Hr1G005290.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0579700-01	Rice	cytosol	82.07	72.98
TraesCS2B01G413600.1	Wheat	cytosol, plastid	85.23	65.91
HORVU2Hr1G094080.1	Barley	cytosol	86.92	63.78
GSMUA_Achr1P03700_001	Banana	plastid	70.04	63.72
KXG26972	Sorghum	plastid	81.01	63.26
Zm00001d026051_P002	Maize	cytosol, mitochondrion, plastid	80.38	62.87
GSMUA_Achr5P10260_001	Banana	plastid	70.89	60.98
GSMUA_Achr4P24950_001	Banana	plastid	63.08	59.09
KRH41224	Soybean	mitochondrion	62.87	55.39
CDY08328	Canola	cytosol, plastid	59.28	52.82
Bra027781.1-P	Field mustard	plastid	59.28	52.62
CDY38217	Canola	plastid	58.86	52.35
KRH59948	Soybean	cytosol, plastid	62.24	52.3
AT1G63850.1	Thale cress	cytosol	60.13	52.01
Solyc08g081380.2.1	Tomato	plastid	63.5	47.18
PGSC0003DMT400032124	Potato	plastid	63.5	46.88
PGSC0003DMT400012106	Potato	plastid	63.29	46.58
VIT_02s0025g00150.t01	Wine grape	plastid	63.71	45.28
HORVU5Hr1G119090.1	Barley	cytosol	13.5	40.76
HORVU5Hr1G098300.1	Barley	cytosol	35.44	32.12
HORVU5Hr1G016360.5	Barley	cytosol	33.54	30.29
HORVU5Hr1G119100.2	Barley	cytosol	26.79	28.48

Protein Annotations

EnsemblPlants:HORVU0Hr1G005290.1	EnsemblPlantsGene:HORVU0Hr1G005290	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR31060	PANTHER:PTHR31060:SF3
PFscan:PS50097	SEG:seg	SUPFAM:SSF54695	UniParc:UPI000B474407	UniProt:A0A287DW60	MapMan:35.1

Description

No Description!

Coordinates

chrchrUn:-:29728693..29730402

Molecular Weight (calculated)

46294.7 Da

IEP (calculated)

5.364

GRAVY (calculated)

-0.119

Length

474 amino acids

Sequence
(BLAST)

001: MTXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXLIGSC SPGNQFNDAD SSDVRLTLSS KDGLSLTLCV HRHILVAHSR FFAAKLSDRW SKQQRTLPHI
101: VEISDCDDVE VYVETLRLMY CKDLRRRLMR EDVAKVLGIL KVSAAIVFDA GVLSCLEYLE AAPWAEDDDE KVAALLTQLH LENSGAGEVL KRVSLELTPS
201: VVTEEVEMGP NCNGGSNVGG GEEVLVRLLQ VVLEGKDEKA RREMKGLVSK MLRENSASRG GAIGGDLRKE SLYSACNGCL CLLREQFVRA AGGDQSEVPQ
301: IARQADNLHW VLDILVERQI AEDFLRTWAI QNELAEMHGK VPAIHRYEVS RVTARLFVGV GKGQILVSKE ARSQLLSTWL EPFYEDFGWM RRACKGLDRH
401: LIEDGLANTI LTLPLATQQE ILLAWFNRFL NSGEDCPNIQ RGFEVWWXXX XXXXXXXXXX XXXXXXXXXX XXXX

Best Arabidopsis Sequence Match ( AT1G63850.1 )
(BLAST)

001: MDYSTATTTA GNGYSSPRDS SFPSSFTKFN SALTAGLLNP MSPPPPPAMH DKTRSSPTLF EMMASEADTI GKVPVQIHNG VLPSPSSSSS SSSAAATAAR
101: TTNVNHLVIS AQDKQALAMQ RISDLLVIRS PGNQFNDPNS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAMKLSDRWS KQQLPPSSSP YIVEISDCDD
201: VEVYIETLML MYCRDLRKKM MRHDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE EYRIASLLSE LHLENVGATE VLRRVSVEAS NGNNGSNGGS
301: NDEVLLNLLH IVLEGKDEKA RRDMKTLVSK MLRENSSGND LRKESLYLAC DGCLHKLKRQ FLQAAESDLE NVDQIARQAD NLHWILDILI DRQIAEDFIV
401: MWASLSELSE VHSKVPVVHR FEISRVTARI FVGIGKGQIL TPKEVRCLLL RNWLTPFYDD FGWMRRASKG LDRYLIEDGL SNTILTLPLA WQQEFFLAWF
501: DRFLNSNEDC PNIQRGFEVW WRRAFWRRKE QSQEPARLRV TASATENS

Arabidopsis Description

BTB/POZ domain-containing protein At1g63850 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.