CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59948	Soybean	cytosol, plastid	90.15	85.99
Os04t0579700-01	Rice	cytosol	68.03	68.67
AT1G63850.1	Thale cress	cytosol	69.33	68.07
CDY08328	Canola	cytosol, plastid	66.91	67.67
Bra027781.1-P	Field mustard	plastid	67.1	67.6
CDY38217	Canola	plastid	66.73	67.35
GSMUA_Achr1P03700_001	Banana	plastid	64.87	66.99
VIT_02s0025g00150.t01	Wine grape	plastid	80.86	65.22
GSMUA_Achr5P10260_001	Banana	plastid	65.99	64.43
Solyc08g081380.2.1	Tomato	plastid	76.39	64.42
PGSC0003DMT400032124	Potato	plastid	76.39	64.02
PGSC0003DMT400012106	Potato	plastid	76.02	63.51
HORVU0Hr1G005290.1	Barley	cytosol	55.39	62.87
GSMUA_Achr4P24950_001	Banana	plastid	58.74	62.45
Zm00001d026051_P002	Maize	cytosol, mitochondrion, plastid	68.03	60.4
KXG26972	Sorghum	plastid	68.03	60.3
TraesCS2B01G413600.1	Wheat	cytosol, plastid	67.29	59.05
HORVU2Hr1G094080.1	Barley	cytosol	67.66	56.35
KRG88696	Soybean	plastid	41.45	45.14
KRH24978	Soybean	plastid	41.08	43.94
KRH08332	Soybean	cytosol	25.28	42.24
KRH69973	Soybean	cytosol	21.56	41.88
KRH76896	Soybean	cytosol	34.94	36.02
KRH28572	Soybean	cytosol	34.39	35.92
KRH64045	Soybean	plastid	28.81	30.33
KRH59568	Soybean	mitochondrion, plastid	28.44	29.82
KRH53894	Soybean	plastid	27.32	29.22
KRH08334	Soybean	cytosol	10.97	26.7
KRH69974	Soybean	cytosol	10.78	26.13
KRH24478	Soybean	mitochondrion	19.52	21.65
KRH29466	Soybean	plastid	19.7	21.5

Protein Annotations

EMBL:ACUP02004754	EnsemblPlants:KRH41224	EnsemblPlantsGene:GLYMA_08G016800	EntrezGene:100817611	Gene3D:3.30.710.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf
PANTHER:PTHR31060	PANTHER:PTHR31060:SF3	PFscan:PS50097	ProteinID:KRH41223.1	ProteinID:KRH41224	ProteinID:KRH41224.1
SEG:seg	SUPFAM:SSF54695	UniParc:UPI0002338417	UniProt:I1KPE0	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr8:+:1347435..1351258

Molecular Weight (calculated)

61174.2 Da

IEP (calculated)

6.951

GRAVY (calculated)

-0.359

Length

538 amino acids

Sequence
(BLAST)

001: MATTTRTTFL KRRSISASAE SPSSYRIRFS PIMDSNESFP SSFSKFNSAL TAGLLNPMSP PPDKTRSSPT LFEMMASEPD VHHRPTTHIP NPTTTNANHK
101: PQILDRQALM MQRISELLGS RSPGNQFNDP LSSDIKLTLS SKDGISVSMN VHRQILVAHS RFFSVKLSDR WTNLQQQRSP VPYEVEIADC DDVEVYIETL
201: RLMYCKDLRK KLMREDVSRV LGILKVSAAI GFDAGVLSCL EYLEAAPWAE DEEEKVASLL SELRLEAVGA GEVLKRVSTD VVSGNEEGSD NEEVLLKLIR
301: VVLEGKDEKA RREMKGLVSK MLRENASQND LRKESLYLAC DDCLQLLRHH FLQAAALDMQ DVSQIARQAD NLHWILDILV DRQIAEDFLK TWASQSDLAE
401: VHSKVPAVHR FEVSRVTARL FVGIGKGQLL ASKDVRCLLL KTWLVPFYDD FGWMRRASKG LDRHLIEDGL SNTILTLPLS WQQDILLAWF NRFLNSGEDC
501: PNIQRGFEVW WRRAFWKRNG EQERTRQLRI TTTSVENP

Best Arabidopsis Sequence Match ( AT1G63850.1 )
(BLAST)

001: MDYSTATTTA GNGYSSPRDS SFPSSFTKFN SALTAGLLNP MSPPPPPAMH DKTRSSPTLF EMMASEADTI GKVPVQIHNG VLPSPSSSSS SSSAAATAAR
101: TTNVNHLVIS AQDKQALAMQ RISDLLVIRS PGNQFNDPNS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAMKLSDRWS KQQLPPSSSP YIVEISDCDD
201: VEVYIETLML MYCRDLRKKM MRHDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE EYRIASLLSE LHLENVGATE VLRRVSVEAS NGNNGSNGGS
301: NDEVLLNLLH IVLEGKDEKA RRDMKTLVSK MLRENSSGND LRKESLYLAC DGCLHKLKRQ FLQAAESDLE NVDQIARQAD NLHWILDILI DRQIAEDFIV
401: MWASLSELSE VHSKVPVVHR FEISRVTARI FVGIGKGQIL TPKEVRCLLL RNWLTPFYDD FGWMRRASKG LDRYLIEDGL SNTILTLPLA WQQEFFLAWF
501: DRFLNSNEDC PNIQRGFEVW WRRAFWRRKE QSQEPARLRV TASATENS

Arabidopsis Description

BTB/POZ domain-containing protein At1g63850 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.