CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027781.1-P	Field mustard	plastid	99.25	99.06
CDY08328	Canola	cytosol, plastid	98.12	98.31
AT1G63850.1	Thale cress	cytosol	91.18	88.69
KRH41224	Soybean	mitochondrion	67.35	66.73
Os04t0579700-01	Rice	cytosol	63.23	63.23
GSMUA_Achr1P03700_001	Banana	plastid	61.54	62.96
KRH59948	Soybean	cytosol, plastid	65.85	62.23
GSMUA_Achr5P10260_001	Banana	plastid	63.04	60.98
GSMUA_Achr4P24950_001	Banana	plastid	57.04	60.08
HORVU0Hr1G005290.1	Barley	cytosol	52.35	58.86
VIT_02s0025g00150.t01	Wine grape	plastid	70.17	56.07
Zm00001d026051_P002	Maize	cytosol, mitochondrion, plastid	63.23	55.61
TraesCS2B01G413600.1	Wheat	cytosol, plastid	63.6	55.3
KXG26972	Sorghum	plastid	62.85	55.19
Solyc08g081380.2.1	Tomato	plastid	64.54	53.92
PGSC0003DMT400032124	Potato	plastid	64.35	53.43
PGSC0003DMT400012106	Potato	plastid	64.54	53.42
HORVU2Hr1G094080.1	Barley	cytosol	63.79	52.63
CDY09229	Canola	plastid	39.21	42.05
CDX77940	Canola	mitochondrion	19.7	41.18
CDX73793	Canola	mitochondrion	6.19	40.74
CDX77942	Canola	mitochondrion	20.07	39.05
CDX77944	Canola	cytosol	33.58	34.96
CDX71164	Canola	cytosol	23.26	25.83

Protein Annotations

EnsemblPlants:CDY38217	EnsemblPlantsGene:GSBRNA2T00065544001	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil	PANTHER:PTHR31060
PANTHER:PTHR31060:SF3	PFscan:PS50097	ProteinID:CDY38217	ProteinID:CDY38217.1	SEG:seg	SUPFAM:SSF54695
UniParc:UPI0004EEBB65	UniProt:A0A078HK29	MapMan:35.1	:	:	:

Description

BnaA09g11720DBnaA09g11720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HK29]

Coordinates

chrLK032418:-:274212..276247

Molecular Weight (calculated)

60062.8 Da

IEP (calculated)

6.604

GRAVY (calculated)

-0.257

Length

533 amino acids

Sequence
(BLAST)

001: MDFSTTTTTT STAANGYSSP RDSSIPSSFT KFNSALTAGL LNPMSPPPPP PATLDKSRAS PTLFEMMSSE AGSPVQIQNL ALPSSSRTRT TNGSHLVISA
101: QDKQALAMQR ISNLLMTRSP GNQFNDPASS DVKLTLSSKD GISITMCVHR QILVAHSRFF AVKLSDRWSK QQQMAPSSSP YIVEISDCDD VEVYIETLML
201: MYCRDLRKKM MRQDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE ECRIASLLSE LHLENVGATE VLRRVSVEAS QNNGSNDEVL LNLLHIVLEG
301: KDEKARRDMK TLVSKMLREN SSGNDLRKES LYLACDGCLH KLKRQFLQAA ESDLENVDQI ARQADNLHWI LDILIDRQIA EDFLVMWASL SELSDVHGKV
401: PVVHRFEISR VTARIFVGIG KGQILTPKEV RCLLLRNWLT PFYDDFAWMK RASKGLDRYV VEDGLSNTIL TLPLAWQQEF FLVWFDRFLN SNDCPNIQRG
501: FEVWWRRAFW RRKEQSQEEP ARLRIIASAT DNS

Best Arabidopsis Sequence Match ( AT1G63850.1 )
(BLAST)

001: MDYSTATTTA GNGYSSPRDS SFPSSFTKFN SALTAGLLNP MSPPPPPAMH DKTRSSPTLF EMMASEADTI GKVPVQIHNG VLPSPSSSSS SSSAAATAAR
101: TTNVNHLVIS AQDKQALAMQ RISDLLVIRS PGNQFNDPNS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAMKLSDRWS KQQLPPSSSP YIVEISDCDD
201: VEVYIETLML MYCRDLRKKM MRHDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE EYRIASLLSE LHLENVGATE VLRRVSVEAS NGNNGSNGGS
301: NDEVLLNLLH IVLEGKDEKA RRDMKTLVSK MLRENSSGND LRKESLYLAC DGCLHKLKRQ FLQAAESDLE NVDQIARQAD NLHWILDILI DRQIAEDFIV
401: MWASLSELSE VHSKVPVVHR FEISRVTARI FVGIGKGQIL TPKEVRCLLL RNWLTPFYDD FGWMRRASKG LDRYLIEDGL SNTILTLPLA WQQEFFLAWF
501: DRFLNSNEDC PNIQRGFEVW WRRAFWRRKE QSQEPARLRV TASATENS

Arabidopsis Description

BTB/POZ domain-containing protein At1g63850 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.