Factsheet for GSMUA_Achr5P10260_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P03700_001	Banana	plastid	84.03	88.87
Os04t0579700-01	Rice	cytosol	77.13	79.74
GSMUA_Achr4P24950_001	Banana	plastid	71.87	78.26
HORVU0Hr1G005290.1	Barley	cytosol	60.98	70.89
Zm00001d026051_P002	Maize	cytosol, mitochondrion, plastid	76.04	69.14
KXG26972	Sorghum	plastid	75.86	68.86
TraesCS2B01G413600.1	Wheat	cytosol, plastid	76.59	68.84
KRH41224	Soybean	mitochondrion	64.43	65.99
HORVU2Hr1G094080.1	Barley	cytosol	76.59	65.33
CDY08328	Canola	cytosol, plastid	61.16	63.35
Bra027781.1-P	Field mustard	plastid	61.34	63.3
CDY38217	Canola	plastid	60.98	63.04
AT1G63850.1	Thale cress	cytosol	62.61	62.96
KRH59948	Soybean	cytosol, plastid	63.34	61.88
Solyc08g081380.2.1	Tomato	plastid	64.79	55.96
PGSC0003DMT400032124	Potato	plastid	64.79	55.61
PGSC0003DMT400012106	Potato	plastid	64.79	55.43
VIT_02s0025g00150.t01	Wine grape	plastid	66.24	54.72
GSMUA_Achr7P08160_001	Banana	cytosol	31.76	46.3
GSMUA_Achr4P30630_001	Banana	cytosol	39.56	42.58
GSMUA_Achr9P28400_001	Banana	cytosol	39.2	42.19
GSMUA_Achr2P17200_001	Banana	cytosol	33.03	35.9
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	33.76	35.36
GSMUA_Achr6P34610_001	Banana	cytosol	32.12	32.9
GSMUA_Achr7P03070_001	Banana	mitochondrion	28.86	30.46
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	27.95	29.79
GSMUA_Achr4P28120_001	Banana	cytosol	30.49	25.81
GSMUA_Achr3P26130_001	Banana	mitochondrion	19.96	23.21
GSMUA_Achr6P24460_001	Banana	cytosol	6.53	22.93

Protein Annotations

EnsemblPlants:GSMUA_Achr5P10260_001	EnsemblPlants:GSMUA_Achr5T10260_001	EnsemblPlantsGene:GSMUA_Achr5G10260_001	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR31060
PANTHER:PTHR31060:SF3	PFscan:PS50097	SEG:seg	SUPFAM:SSF54695	UniParc:UPI00029498C2	UniProt:M0SXA5
MapMan:35.1	:	:	:	:	:

Description

H-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G10260_001]

Coordinates

chr5:-:7326789..7329383

Molecular Weight (calculated)

60697.2 Da

IEP (calculated)

5.275

GRAVY (calculated)

-0.205

Length

551 amino acids

Sequence
(BLAST)

001: MDAPPSTVSA VAFAASVASP YPPYPSSYSK FNSALNAGLL NPMSPPPPPL DKTRSSPTLF DMMANEQDYH PLPAAHAGPL QMHLPGRAAD APTAASAQDR
101: QLLLQERVAD IIGSCSPGNQ LNDAESGDVR LTLSSNDGLT VSLNVHRHIL VAHSRFFAAK LSDRWSKQQR SLPHIVEISD CDDVEIYVET LRLMYCKDLR
201: RRLMREDVSN VLGILKVSAA ISFDAGVLSC LEYLEAAPWA EDEEEKVALL LSQLQLESSG AEEVLKRVSL EVAPSAADEV DCGNGGEEIL IRLLQVVLEG
301: KDEKARREMK GLVSKMLREN NTATQCGGLG GGAGANGGGD LSKESLYSAC DGCLCSLRHH FARAAASDLT EVAQIARQSD NLHWILDILI DRQIADDFLR
401: TWACQAELSE MHSRVPAIHR YEVSRVTARL FVGVGKGHIL VSKESRSLLL RTWLEPFYED FGWMRRACKG LDRHLIEDGL ANTILTLPLA TQQEILLAWF
501: DRFLNAGDDC PNIQRGFEVW WRRAFWRRNG EADQLPPQLR ITAAAACENS C

Best Arabidopsis Sequence Match ( AT1G63850.1 )
(BLAST)

001: MDYSTATTTA GNGYSSPRDS SFPSSFTKFN SALTAGLLNP MSPPPPPAMH DKTRSSPTLF EMMASEADTI GKVPVQIHNG VLPSPSSSSS SSSAAATAAR
101: TTNVNHLVIS AQDKQALAMQ RISDLLVIRS PGNQFNDPNS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAMKLSDRWS KQQLPPSSSP YIVEISDCDD
201: VEVYIETLML MYCRDLRKKM MRHDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE EYRIASLLSE LHLENVGATE VLRRVSVEAS NGNNGSNGGS
301: NDEVLLNLLH IVLEGKDEKA RRDMKTLVSK MLRENSSGND LRKESLYLAC DGCLHKLKRQ FLQAAESDLE NVDQIARQAD NLHWILDILI DRQIAEDFIV
401: MWASLSELSE VHSKVPVVHR FEISRVTARI FVGIGKGQIL TPKEVRCLLL RNWLTPFYDD FGWMRRASKG LDRYLIEDGL SNTILTLPLA WQQEFFLAWF
501: DRFLNSNEDC PNIQRGFEVW WRRAFWRRKE QSQEPARLRV TASATENS

Arabidopsis Description

BTB/POZ domain-containing protein At1g63850 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.