Factsheet for GSMUA_Achr6P34610_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P08160_001	Banana	cytosol	50.0	71.16
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	67.47	69.01
GSMUA_Achr2P17200_001	Banana	cytosol	62.64	66.47
Os03t0769400-01	Rice	cytosol	58.92	60.73
KXG37471	Sorghum	cytosol	58.74	60.08
TraesCS5A01G404600.1	Wheat	cytosol	58.18	59.62
HORVU5Hr1G098300.1	Barley	cytosol	57.43	59.08
KRH69973	Soybean	cytosol	30.3	58.84
TraesCS5D01G414700.1	Wheat	cytosol	57.06	58.59
TraesCS5B01G409500.1	Wheat	cytosol	57.06	58.59
Os07t0123500-01	Rice	cytosol	57.25	58.44
VIT_04s0023g01000.t01	Wine grape	cytosol	56.69	58.21
Zm00001d034194_P002	Maize	cytosol	57.25	57.68
KRH08332	Soybean	cytosol	34.2	57.14
KXG34316	Sorghum	cytosol	56.51	55.99
CDX73793	Canola	mitochondrion	8.36	55.56
Bra041065.1-P	Field mustard	cytosol	22.68	55.2
PGSC0003DMT400026018	Potato	cytosol	54.46	54.66
Bra041074.1-P	Field mustard	mitochondrion	8.18	54.32
Zm00001d007975_P001	Maize	cytosol	55.02	54.31
CDX77940	Canola	mitochondrion	25.65	54.12
KRH76896	Soybean	cytosol	51.86	53.45
KRH28572	Soybean	cytosol	50.74	53.01
Solyc02g089950.1.1	Tomato	cytosol	53.9	52.63
CDX77942	Canola	mitochondrion	26.58	52.19
AT3G50780.1	Thale cress	cytosol	49.63	51.35
CDX77944	Canola	cytosol	47.96	50.39
GSMUA_Achr4P28120_001	Banana	cytosol	59.11	48.85
Zm00001d020128_P001	Maize	mitochondrion	24.91	43.79
KRH08334	Soybean	cytosol	17.84	43.44
KRH69974	Soybean	cytosol	17.84	43.24
GSMUA_Achr1P03700_001	Banana	plastid	32.53	33.59
GSMUA_Achr4P24950_001	Banana	plastid	30.3	32.21
GSMUA_Achr5P10260_001	Banana	plastid	32.9	32.12
GSMUA_Achr9P28400_001	Banana	cytosol	30.48	32.03
GSMUA_Achr4P30630_001	Banana	cytosol	30.11	31.64
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	26.77	27.85
GSMUA_Achr7P03070_001	Banana	mitochondrion	26.39	27.2
GSMUA_Achr6P24460_001	Banana	cytosol	7.06	24.2
GSMUA_Achr3P26130_001	Banana	mitochondrion	17.66	20.04

Protein Annotations

EnsemblPlants:GSMUA_Achr6P34610_001	EnsemblPlants:GSMUA_Achr6T34610_001	EnsemblPlantsGene:GSMUA_Achr6G34610_001	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR31060
PANTHER:PTHR31060:SF5	PFAM:PF00651	PFscan:PS50097	SEG:seg	SUPFAM:SSF54695	UniParc:UPI0002956773
UniProt:M0TCQ4	MapMan:35.1	:	:	:	:

Description

H-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G34610_001]

Coordinates

chr6:-:33140870..33142600

Molecular Weight (calculated)

60534.3 Da

IEP (calculated)

7.198

GRAVY (calculated)

-0.347

Length

538 amino acids

Sequence
(BLAST)

001: MADFTVRRLQ QGHTRIKTVP IAVTPEGFWC CPSPAAIEKN LKNRNHQDKR KTASPPNSKA SSIQRSSLPP VDKRLVSAPL RSKLADDDHS HLNSATAASI
101: SSNSVDRPQM QSIETKQRKI YASFGRPETS DMKVTLHGKE GSSMRMSVHR NILAEHSSFF ADKLSRLSPA SQVEIADCED VEIFLEVVGL MYCEEIKCRL
201: IKRSLSRVLR ILKVAESLGF HACIESCLDY LEAVPWVEEE EEQNVISSVR HLRDDSYGVG PILNRVASDP SNPPTDTLAQ IMDLVLGSSE DRGRREMKSL
301: VLNLLKESDR DGSVGICTET LYGSCRHCLE SLLNLFRCAS EPGFSHEPLG SRDRVVRRIS LEVDNLLWLV EILAVRHAAD EFASIWASQD ELAELHSKLP
401: TMARHQVSCV TSRLFVAIGN REMLPSKETR KLLLRVWLQP LIDDYGWLRR GSSRSFDRHA VEEGIDRTIT TLPLEEQQSV LLSWLRSFLK VGDDCPNLRG
501: AFEVWWRRTF TMPYVEHLEG SFRSEKAGGG RGCLGLDA

Best Arabidopsis Sequence Match ( AT3G50780.2 )
(BLAST)

001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE

Arabidopsis Description

BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.