Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G404600.1 | Wheat | cytosol | 95.6 | 95.24 |
| TraesCS5B01G409500.1 | Wheat | cytosol | 95.41 | 95.23 |
| TraesCS5D01G414700.1 | Wheat | cytosol | 94.84 | 94.66 |
| Os03t0769400-01 | Rice | cytosol | 84.51 | 84.67 |
| KXG37471 | Sorghum | cytosol | 82.98 | 82.51 |
| Zm00001d034194_P002 | Maize | cytosol | 80.5 | 78.84 |
| CDX73793 | Canola | mitochondrion | 10.32 | 66.67 |
| Bra041074.1-P | Field mustard | mitochondrion | 10.13 | 65.43 |
| GSMUA_Achr9P26390_001 | Banana | cytosol, nucleus, peroxisome | 65.58 | 65.21 |
| Bra041065.1-P | Field mustard | cytosol | 26.39 | 62.44 |
| VIT_04s0023g01000.t01 | Wine grape | cytosol | 62.52 | 62.4 |
| KRH69973 | Soybean | cytosol | 32.89 | 62.09 |
| KRH08332 | Soybean | cytosol | 38.05 | 61.8 |
| CDX77940 | Canola | mitochondrion | 30.02 | 61.57 |
| CDX77942 | Canola | mitochondrion | 31.36 | 59.85 |
| GSMUA_Achr6P34610_001 | Banana | cytosol | 59.08 | 57.43 |
| HORVU5Hr1G016360.5 | Barley | cytosol | 57.17 | 56.95 |
| PGSC0003DMT400026018 | Potato | cytosol | 58.13 | 56.72 |
| KRH28572 | Soybean | cytosol | 55.26 | 56.12 |
| KRH76896 | Soybean | cytosol | 55.83 | 55.94 |
| Solyc02g089950.1.1 | Tomato | cytosol | 57.74 | 54.81 |
| CDX77944 | Canola | cytosol | 53.54 | 54.69 |
| AT3G50780.1 | Thale cress | cytosol | 53.92 | 54.23 |
| KRH08334 | Soybean | cytosol | 19.31 | 45.7 |
| KRH69974 | Soybean | cytosol | 19.12 | 45.05 |
| HORVU5Hr1G119090.1 | Barley | cytosol | 11.09 | 36.94 |
| HORVU0Hr1G005290.1 | Barley | cytosol | 32.12 | 35.44 |
| HORVU2Hr1G094080.1 | Barley | cytosol | 36.52 | 29.57 |
| HORVU5Hr1G119100.2 | Barley | cytosol | 23.52 | 27.58 |
Protein Annotations
| EMBL:AK374924 | EnsemblPlants:HORVU5Hr1G098300.1 | EnsemblPlantsGene:HORVU5Hr1G098300 | Gene3D:3.30.710.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:BTB/POZ_dom | InterPro:BTB/POZ_dom_prot | InterPro:IPR000210 | InterPro:SKP1/BTB/POZ_sf | PANTHER:PTHR31060 |
| PANTHER:PTHR31060:SF28 | PFscan:PS50097 | SEG:seg | SUPFAM:SSF54695 | UniParc:UPI00020088FF | UniProt:F2EFJ8 |
| MapMan:35.1 | : | : | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EFJ8]
Coordinates
chrchr5H:+:607037073..607041609
Molecular Weight (calculated)
58528.0 Da
IEP (calculated)
8.078
GRAVY (calculated)
-0.307
Length
523 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEFKVGSLD ARATKFRTVP IAVTPEGFWC CPSQTVLQKT VKNQNQHTRP KVGASPPASK ASSVQRAPTI SSERRTHSTP TRARANSDEQ RCPPADSAAP
101: NPPKVASERP QKQHKISVGF GQIEMSDLRI VLYGKDGVAV KMSVHKNILA ENSSFFADKL SRQSPVSSIE VPDCEDVEIY VETVGLMYCN DVKQRLIKQS
201: VPRVLRILKV AELLSFRACV LSCLNYLEAV PWAGEEEENV VSSVRHLQTE DYGVTPILKR VCSDLTSPPN DTFVRIIELV LKSSDDRGRR EMKSLVLKLL
301: KESSSSASSS ADLCVDTLYR YCQNCLESLL TLFQRASDND FSEQPLELKE SVLRQITLEA DNLLWLTEIL AGRNAAEEFA GLWSNQRELA GLHSKLPTKS
401: RHLVSCVTAR LFVAIGKGEM LPSKDTRQLL LDVWLQPLMD DYNWLQHGCR SFDRTVVEEG IGSTILTLPL EDQQAILLSW LGSFLKVGNS CPNLQKAFEV
501: WWRRTFVRPY VEQQGSRSQS GRS
101: NPPKVASERP QKQHKISVGF GQIEMSDLRI VLYGKDGVAV KMSVHKNILA ENSSFFADKL SRQSPVSSIE VPDCEDVEIY VETVGLMYCN DVKQRLIKQS
201: VPRVLRILKV AELLSFRACV LSCLNYLEAV PWAGEEEENV VSSVRHLQTE DYGVTPILKR VCSDLTSPPN DTFVRIIELV LKSSDDRGRR EMKSLVLKLL
301: KESSSSASSS ADLCVDTLYR YCQNCLESLL TLFQRASDND FSEQPLELKE SVLRQITLEA DNLLWLTEIL AGRNAAEEFA GLWSNQRELA GLHSKLPTKS
401: RHLVSCVTAR LFVAIGKGEM LPSKDTRQLL LDVWLQPLMD DYNWLQHGCR SFDRTVVEEG IGSTILTLPL EDQQAILLSW LGSFLKVGNS CPNLQKAFEV
501: WWRRTFVRPY VEQQGSRSQS GRS
001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE
Arabidopsis Description
BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.