Factsheet for Solyc02g089950.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026018	Potato	cytosol	94.19	96.83
VIT_04s0023g01000.t01	Wine grape	cytosol	72.78	76.53
KRH08332	Soybean	cytosol	42.47	72.67
KRH69973	Soybean	cytosol	36.3	72.2
GSMUA_Achr7P08160_001	Banana	cytosol	47.91	69.84
KRH76896	Soybean	cytosol	65.52	69.16
KRH28572	Soybean	cytosol	64.61	69.13
Bra041065.1-P	Field mustard	cytosol	26.68	66.52
CDX73793	Canola	mitochondrion	9.62	65.43
GSMUA_Achr2P17200_001	Banana	cytosol	59.89	65.09
CDX77940	Canola	mitochondrion	29.95	64.71
Bra041074.1-P	Field mustard	mitochondrion	9.44	64.2
AT3G50780.1	Thale cress	cytosol	60.07	63.65
CDX77944	Canola	cytosol	58.62	63.09
CDX77942	Canola	mitochondrion	31.22	62.77
Os12t0596600-01	Rice	cytosol	26.5	62.66
KRH08334	Soybean	cytosol	24.86	61.99
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	58.62	61.41
KRH69974	Soybean	cytosol	24.5	60.81
KXG37471	Sorghum	cytosol	57.89	60.65
Os03t0769400-01	Rice	cytosol	57.35	60.54
Zm00001d034194_P002	Maize	cytosol	57.89	59.74
TraesCS5D01G414700.1	Wheat	cytosol	55.72	58.59
TraesCS5A01G404600.1	Wheat	cytosol	55.54	58.29
TraesCS5B01G409500.1	Wheat	cytosol	55.35	58.21
Os07t0123500-01	Rice	cytosol	55.35	57.87
HORVU5Hr1G098300.1	Barley	cytosol	54.81	57.74
KXG34316	Sorghum	cytosol	53.36	54.14
HORVU5Hr1G016360.5	Barley	cytosol	51.54	54.1
TraesCS5B01G071200.2	Wheat	cytosol	51.54	53.99
TraesCS5A01G060900.1	Wheat	cytosol	51.0	53.93
GSMUA_Achr6P34610_001	Banana	cytosol	52.63	53.9
TraesCS5D01G072400.2	Wheat	cytosol	50.82	53.44
Zm00001d007975_P001	Maize	cytosol	51.91	52.48
Zm00001d030950_P001	Maize	mitochondrion	46.46	48.3
OQU85769	Sorghum	mitochondrion	12.52	48.25
GSMUA_Achr4P28120_001	Banana	cytosol	53.54	45.31
Zm00001d030947_P001	Maize	plastid	45.01	44.93
OQU79497	Sorghum	mitochondrion	45.92	43.32
Zm00001d020128_P001	Maize	mitochondrion	22.87	41.18
Solyc11g072900.1.1	Tomato	cytosol	18.15	37.59
Solyc11g072720.1.1	Tomato	plastid	32.85	36.35
Solyc08g081380.2.1	Tomato	plastid	36.84	31.82
Solyc11g005950.1.1	Tomato	cytosol, plastid	24.5	24.82
Solyc01g109600.2.1	Tomato	cytosol	6.35	22.58

Protein Annotations

EnsemblPlants:Solyc02g089950.1.1	EnsemblPlantsGene:Solyc02g089950.1	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom_prot	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR31060
PANTHER:PTHR31060:SF5	SEG:seg	SUPFAM:SSF54695	UniParc:UPI0002768E63	UniProt:K4BCE6	MapMan:35.1

Description

No Description!

Coordinates

chr2:-:51636724..51640441

Molecular Weight (calculated)

61579.2 Da

IEP (calculated)

8.083

GRAVY (calculated)

-0.281

Length

551 amino acids

Sequence
(BLAST)

001: MAEIRLTKVE QGQTKIRNVP IAVTPEGFWC CPSPNVFQKS LKTPNPLNKP KAPLPTTQTP AHKKQTSVTE KRPASAAPKS GAVSDEKRGV SSDTPSVTAS
101: VPAERTPRSK TENVPRKVSI EFGEPGTSDL RVILLGKQGF TVKLNVHKNI LVANSSFFAN KISVQQPVFP CIEIDDCEDV EICVETIGLM YCKEMKQRLI
201: KQSVSRVLRI IKVAEQLGFQ SCMQSCLEYL EAVPWVGEEE EERVVSSVLR LQSDGIGVTP VLKRVSSDIS KPHKDTFSHI LELVLKSNEE RGRREMKSVV
301: LKLLRENNCL PSSSGSVDSY NEIIYGSCRS CLDSILILFK QAAEPEFSSN STDCREPVVK QMVLEADNLS WMLEILTDRQ AADEFAVMWA SQQELASLHT
401: KLPIVSRHHV SCITAKLFVG IGKGELLPSK DTRNLLLQTW LQPLINDYSW LQHGSRSFDR KVVEEGIGRT ILTLPLEEQQ SILLSWLGSF LKSGDNCPNL
501: QRAFEVWWRR TFVRPYAETG STRPLDHVTT PKLATREAMI EEATPLRSPV A

Best Arabidopsis Sequence Match ( AT3G50780.2 )
(BLAST)

001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE

Arabidopsis Description

BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.