CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73793	Canola	mitochondrion	30.59	96.3
CDX77942	Canola	mitochondrion	98.04	91.24
Bra041065.1-P	Field mustard	cytosol	59.61	68.78
KRH08332	Soybean	cytosol	61.57	48.76
KRH69973	Soybean	cytosol	51.76	47.65
CDX77944	Canola	cytosol	92.94	46.29
AT3G50780.1	Thale cress	cytosol	87.06	42.69
Os12t0596600-01	Rice	cytosol	38.82	42.49
GSMUA_Achr7P08160_001	Banana	cytosol	59.22	39.95
VIT_04s0023g01000.t01	Wine grape	cytosol	66.67	32.44
KRH76896	Soybean	cytosol	65.1	31.8
KRH28572	Soybean	cytosol	63.53	31.46
PGSC0003DMT400026018	Potato	cytosol	65.49	31.16
KXG37471	Sorghum	cytosol	63.53	30.8
Zm00001d034194_P002	Maize	cytosol	64.31	30.71
GSMUA_Achr2P17200_001	Banana	cytosol	60.0	30.18
HORVU5Hr1G098300.1	Barley	cytosol	61.57	30.02
TraesCS5D01G414700.1	Wheat	cytosol	61.57	29.96
Solyc02g089950.1.1	Tomato	cytosol	64.71	29.95
Os03t0769400-01	Rice	cytosol	61.18	29.89
TraesCS5B01G409500.1	Wheat	cytosol	61.18	29.77
TraesCS5A01G404600.1	Wheat	cytosol	61.18	29.71
Os07t0123500-01	Rice	cytosol	58.82	28.46
TraesCS5A01G060900.1	Wheat	cytosol	57.25	28.02
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	57.65	27.95
TraesCS5D01G072400.2	Wheat	cytosol	56.86	27.67
HORVU5Hr1G016360.5	Barley	cytosol	56.86	27.62
TraesCS5B01G071200.2	Wheat	cytosol	56.86	27.57
KXG34316	Sorghum	cytosol	56.47	26.52
Zm00001d007975_P001	Maize	cytosol	54.9	25.69
GSMUA_Achr6P34610_001	Banana	cytosol	54.12	25.65
Zm00001d030950_P001	Maize	mitochondrion	51.76	24.91
Zm00001d020128_P001	Maize	mitochondrion	29.41	24.51
Zm00001d030947_P001	Maize	plastid	49.41	22.83
OQU79497	Sorghum	mitochondrion	49.02	21.4
GSMUA_Achr4P28120_001	Banana	cytosol	54.12	21.2
CDY08328	Canola	cytosol, plastid	41.57	19.92
CDY38217	Canola	plastid	41.18	19.7
CDY09229	Canola	plastid	37.65	19.32
OQU85769	Sorghum	mitochondrion	10.59	18.88
CDX71164	Canola	cytosol	24.31	12.92
KRH08334	Soybean	cytosol	5.1	5.88
KRH69974	Soybean	cytosol	5.1	5.86

Protein Annotations

EnsemblPlants:CDX77940	EnsemblPlantsGene:GSBRNA2T00129191001	InterPro:BTB/POZ_dom_prot	PANTHER:PTHR31060	PANTHER:PTHR31060:SF5	ProteinID:CDX77940
ProteinID:CDX77940.1	SEG:seg	UniParc:UPI0004EEA05B	MapMan:35.1	:	:

Description

BnaA09g31350D

Coordinates

chrLK031814:-:139412..141129

Molecular Weight (calculated)

28890.1 Da

IEP (calculated)

9.912

GRAVY (calculated)

-0.213

Length

255 amino acids

Sequence
(BLAST)

001: MNQRLMRQSV TRVLRVLKVA ELLGFGSCVQ SCLDYLEADK LCLGLKVISS ILRLKTEGVS VVTTPVLKRV ASSSVDPPKE TLSRIIELVL RSKEEKSPER
101: QAAKEFSVTW ANQTELALLH EKLPLVSRYH ISRVTSRLFV GLGRGELLPS KDTRLLLLTT WLQPLFKDYN WLQHGCRSFD GKLVEEGIGR TILTLPLEDN
201: QQRILMSWLG SFLNGGDGCP NLQRAFEVWW RRSFVRPYSD RQGSGVSQTD STSKE

Best Arabidopsis Sequence Match ( AT3G50780.1 )
(BLAST)

001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE

Arabidopsis Description

BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.