CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G13690.1	Thale cress	cytosol, plastid	73.75	65.07
VIT_04s0044g01240.t01	Wine grape	nucleus	52.5	45.73
KRH53894	Soybean	plastid	47.71	45.53
KRH59568	Soybean	mitochondrion, plastid	48.54	45.42
KRH64045	Soybean	plastid	47.92	45.01
HORVU5Hr1G119090.1	Barley	cytosol	14.38	43.95
PGSC0003DMT400073782	Potato	cytosol, plastid	49.38	43.57
Solyc11g005950.1.1	Tomato	cytosol, plastid	48.96	43.2
GSMUA_Achr7P03070_001	Banana	mitochondrion	41.88	38.51
OQU90655	Sorghum	mitochondrion	40.83	37.19
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	39.58	36.75
Zm00001d012880_P001	Maize	mitochondrion	38.75	36.54
Os04t0278000-01	Rice	mitochondrion, plastid	38.33	34.91
Zm00001d005480_P001	Maize	cytosol, plastid	40.42	34.77
KXG34836	Sorghum	mitochondrion, plastid	41.04	33.68
TraesCS4A01G349300.1	Wheat	mitochondrion	37.29	33.52
TraesCS5B01G523400.1	Wheat	mitochondrion	37.29	33.33
HORVU5Hr1G119100.2	Barley	cytosol	30.62	32.96
Os07t0259700-01	Rice	mitochondrion	37.92	32.27
EES15778	Sorghum	plastid	34.17	31.66
Zm00001d019337_P003	Maize	plastid	38.12	31.02
Os12t0188500-01	Rice	plastid	32.92	30.15
Zm00001d041800_P001	Maize	plastid	33.12	29.94
CDX73793	Canola	mitochondrion	5.0	29.63
CDX77940	Canola	mitochondrion	12.92	24.31
CDY09229	Canola	plastid	24.79	23.94
CDX77942	Canola	mitochondrion	13.54	23.72
CDY08328	Canola	cytosol, plastid	25.83	23.31
CDY38217	Canola	plastid	25.83	23.26
CDX77944	Canola	cytosol	23.75	22.27

Protein Annotations

EnsemblPlants:CDX71164	EnsemblPlantsGene:GSBRNA2T00144669001	InterPro:BTB/POZ_dom_prot	PANTHER:PTHR31060	PANTHER:PTHR31060:SF2	ProteinID:CDX71164
ProteinID:CDX71164.1	SEG:seg	UniParc:UPI0004EEBDFA	MapMan:35.1	:	:

Description

BnaC07g04430DBTB/POZ domain-containing protein At2g13690 [Source:Projected from Arabidopsis thaliana (AT2G13690) UniProtKB/Swiss-Prot;Acc:Q9SKH2]

Coordinates

chrLK031792:-:289792..291980

Molecular Weight (calculated)

54347.1 Da

IEP (calculated)

5.150

GRAVY (calculated)

-0.359

Length

480 amino acids

Sequence
(BLAST)

001: MVTRLDDSVQ LICPYKRVGS GRMGDFSIQA KTQPQQHQRT KPENVDKAGP KSVPCSPQSS KSALIGRIDP RRILSPGRVS PIDSDLTINT MQEETTHEEE
101: EEEVVVDSLP NLHPGPGYDA RVSLNGRNGG FLGLQMSSEV LSANSDVFAG LIAQKSPGLT CRMEVSDVEN LGVFKETVEL MFEESNGIIK KLMKMGVYRA
201: IDVLEVVAGI KVSRAGLSYL KYLEAVPWTE DEEERLRRVL ALYNLDDAAT EEILARFNSN ETENTQENLS KQLVWSITSC SDTNPRNELI SLVKGILCKS
301: SVYEKEQPEI NKEDIYKAGK YCVYSLVKLF EEGRSSKSGR PLIEGISREV ENIIWLLEIM IDWEIAEEFV EIWGKQRKLV EMHEEASPMV RYELSIVTGL
401: MFTAIGKGRV CKKGLDAREV EEGMGHTLLT LPLTQQYPVF IEWFRWFSKH GTECPNFRKA FQIWWRRSFL RGVDSSSICR

Best Arabidopsis Sequence Match ( AT2G13690.1 )
(BLAST)

001: MTMGDSDLRK PTNFGTGHLS RRRSWCCSFA VPPASPDTRS ISSRNHIPAK SQQQRPKLVP CSPQSSKSAL NIVNRIDPRR ILSPGRVSPI DSDPTVTTMQ
101: ETETTQEEED DAVVVDSTPN LRSESFRAPK IEVTGSGLSE GYDARLSLKG RNGGGVLVLE LSLEVLAANS DVFSGLIAEE KKCSSSSSSL GLKNTCRIEV
201: CDVENLGVFR ETVELMFEES NVIIKKFMTM GVYRAIDVLE VAAGIKFSRA VLSCLKYLEA VPWTEDEEEK LRRLLGIYSF DDDAVSEILA RFNSNETENL
301: QDSLSKKLVW SITSCSDVNP RNELKSLVKG LLCKSSVYEK EQPEINKEDI YRAGKCCVDS LAKLFEEGSS SSSSKKEKPL IESISREVEN INWLLEIMID
401: REIAEEFVEI WGKQRRLVEM HERVSPMVRY EVSRVTGAIF IAMGKRRVQC GGEARAGLVE AWFKPMLVDF GWLQRCKKGL DMREVEEGMG QTLLTLPVKE
501: QYQVFMEWFR WFSKHGTECP NLSKAFQIWW RRSFLRGVES STCR

Arabidopsis Description

PRL1-IFGBTB/POZ domain-containing protein At2g13690 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKH2]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.