Factsheet for GSMUA_Achr7P03070_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G119090.1	Barley	cytosol	21.46	71.34
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	67.24	67.89
Os04t0278000-01	Rice	mitochondrion, plastid	59.39	58.82
OQU90655	Sorghum	mitochondrion	57.66	57.12
TraesCS4A01G349300.1	Wheat	mitochondrion	58.05	56.74
TraesCS5B01G523400.1	Wheat	mitochondrion	58.24	56.61
HORVU5Hr1G119100.2	Barley	cytosol	47.89	56.05
Zm00001d012880_P001	Maize	mitochondrion	54.6	55.99
Os07t0259700-01	Rice	mitochondrion	57.85	53.55
Zm00001d005480_P001	Maize	cytosol, plastid	56.32	52.69
KXG34836	Sorghum	mitochondrion, plastid	57.85	51.62
KRH64045	Soybean	plastid	49.62	50.68
KRH59568	Soybean	mitochondrion, plastid	49.43	50.29
KRH53894	Soybean	plastid	47.51	49.3
Zm00001d019337_P003	Maize	plastid	55.36	48.98
VIT_04s0044g01240.t01	Wine grape	nucleus	51.34	48.64
PGSC0003DMT400073782	Potato	cytosol, plastid	46.93	45.04
Solyc11g005950.1.1	Tomato	cytosol, plastid	46.74	44.85
EES15778	Sorghum	plastid	44.25	44.59
AT2G13690.1	Thale cress	cytosol, plastid	45.21	43.38
CDX71164	Canola	cytosol	38.51	41.88
Os12t0188500-01	Rice	plastid	41.38	41.22
Zm00001d041800_P001	Maize	plastid	41.38	40.68
GSMUA_Achr1P03700_001	Banana	plastid	31.61	31.67
GSMUA_Achr7P08160_001	Banana	cytosol	22.8	31.48
GSMUA_Achr4P24950_001	Banana	plastid	28.93	29.84
GSMUA_Achr5P10260_001	Banana	plastid	30.46	28.86
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	28.35	28.14
GSMUA_Achr2P17200_001	Banana	cytosol	27.2	28.01
GSMUA_Achr6P34610_001	Banana	cytosol	27.2	26.39
GSMUA_Achr9P28400_001	Banana	cytosol	25.86	26.37
GSMUA_Achr4P30630_001	Banana	cytosol	25.29	25.78
GSMUA_Achr4P28120_001	Banana	cytosol	24.14	19.35
GSMUA_Achr3P26130_001	Banana	mitochondrion	17.43	19.2
GSMUA_Achr6P24460_001	Banana	cytosol	5.75	19.11

Protein Annotations

EnsemblPlants:GSMUA_Achr7P03070_001	EnsemblPlants:GSMUA_Achr7T03070_001	EnsemblPlantsGene:GSMUA_Achr7G03070_001	InterPro:BTB/POZ_dom_prot	ncoils:Coil	PANTHER:PTHR31060
PANTHER:PTHR31060:SF2	SEG:seg	UniParc:UPI000295E1E0	UniProt:M0TE97	MapMan:35.1	:

Description

H-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G03070_001]

Coordinates

chr7:+:2439381..2442747

Molecular Weight (calculated)

58781.3 Da

IEP (calculated)

8.447

GRAVY (calculated)

-0.245

Length

522 amino acids

Sequence
(BLAST)

001: MAETRGVRSA SAGRRAPGLR RVWCCSFVAA PDSPDHRRSS STHRELRPSK TPPKLSHPGS FHSSPSPSSK LGLGIIDPRR ILSPGRVSPI DSDTPLGPLP
101: GILDSASIST TAPKTDTRVS LRERSLDLRL CLRGKDGRCL VLELDSAVLC ESSAFFAARV MDSTRKVSDA DCQKIEVAGV EDVDVFKETI ELMYEKDASR
201: WLMKAGVSRA IGVLEVCLKI MFDRGMRSCL KYIEAVPWTE TEEEKLKRLF AMSTIDKAIC EDVLARLDPQ DCNHSEDLAV QLIQSVTNAT NGNARREMRS
301: LVNGLLSKSS VYQKEPVGLN KDSLYNVCHS CLNSLVNLFE EALNSIPMDQ MTAGKRTKPL IERVSKQVEN LNWLLEILID KEMAEDFVGL WANQKELIRM
401: HESASPMLRY ELSRISANVF IALGLRKLQC PGGMRFSILQ SWFGPMLMDF GWLQRCSKGL DMRMLEESLG QVILTLRLKQ QQILFEEWFR CFAGHGTECP
501: NLCKAFQVWW RRSFVRTCEA RR

Best Arabidopsis Sequence Match ( AT2G13690.1 )
(BLAST)

001: MTMGDSDLRK PTNFGTGHLS RRRSWCCSFA VPPASPDTRS ISSRNHIPAK SQQQRPKLVP CSPQSSKSAL NIVNRIDPRR ILSPGRVSPI DSDPTVTTMQ
101: ETETTQEEED DAVVVDSTPN LRSESFRAPK IEVTGSGLSE GYDARLSLKG RNGGGVLVLE LSLEVLAANS DVFSGLIAEE KKCSSSSSSL GLKNTCRIEV
201: CDVENLGVFR ETVELMFEES NVIIKKFMTM GVYRAIDVLE VAAGIKFSRA VLSCLKYLEA VPWTEDEEEK LRRLLGIYSF DDDAVSEILA RFNSNETENL
301: QDSLSKKLVW SITSCSDVNP RNELKSLVKG LLCKSSVYEK EQPEINKEDI YRAGKCCVDS LAKLFEEGSS SSSSKKEKPL IESISREVEN INWLLEIMID
401: REIAEEFVEI WGKQRRLVEM HERVSPMVRY EVSRVTGAIF IAMGKRRVQC GGEARAGLVE AWFKPMLVDF GWLQRCKKGL DMREVEEGMG QTLLTLPVKE
501: QYQVFMEWFR WFSKHGTECP NLSKAFQIWW RRSFLRGVES STCR

Arabidopsis Description

PRL1-IFGBTB/POZ domain-containing protein At2g13690 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKH2]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.