Factsheet for GSMUA_Achr2P17200_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P08160_001	Banana	cytosol	63.12	84.66
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	75.35	72.62
Os12t0596600-01	Rice	cytosol	31.56	68.67
KRH69973	Soybean	cytosol	36.88	67.51
KRH08332	Soybean	cytosol	42.01	66.15
VIT_04s0023g01000.t01	Wine grape	cytosol	68.05	65.84
CDX73793	Canola	mitochondrion	10.26	64.2
Bra041065.1-P	Field mustard	cytosol	27.81	63.8
Bra041074.1-P	Field mustard	mitochondrion	10.06	62.96
GSMUA_Achr6P34610_001	Banana	cytosol	66.47	62.64
KRH28572	Soybean	cytosol	63.12	62.14
PGSC0003DMT400026018	Potato	cytosol	65.68	62.13
HORVU5Hr1G016360.5	Barley	cytosol	63.91	61.71
KRH76896	Soybean	cytosol	63.51	61.69
TraesCS5A01G060900.1	Wheat	cytosol	63.12	61.42
TraesCS5B01G071200.2	Wheat	cytosol	63.31	61.03
TraesCS5D01G072400.2	Wheat	cytosol	62.92	60.88
CDX77940	Canola	mitochondrion	30.18	60.0
Solyc02g089950.1.1	Tomato	cytosol	65.09	59.89
CDX77942	Canola	mitochondrion	31.36	58.03
AT3G50780.1	Thale cress	cytosol	57.4	55.96
CDX77944	Canola	cytosol	55.82	55.27
OQU85769	Sorghum	mitochondrion	15.58	55.24
GSMUA_Achr4P28120_001	Banana	cytosol	70.41	54.84
Zm00001d030950_P001	Maize	mitochondrion	57.0	54.53
Zm00001d030947_P001	Maize	plastid	55.62	51.09
OQU79497	Sorghum	mitochondrion	56.8	49.32
KRH08334	Soybean	cytosol	20.71	47.51
KRH69974	Soybean	cytosol	20.51	46.85
GSMUA_Achr1P03700_001	Banana	plastid	34.91	33.97
GSMUA_Achr4P24950_001	Banana	plastid	33.53	33.6
GSMUA_Achr9P28400_001	Banana	cytosol	33.73	33.4
GSMUA_Achr5P10260_001	Banana	plastid	35.9	33.03
GSMUA_Achr4P30630_001	Banana	cytosol	33.14	32.81
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	28.4	27.85
GSMUA_Achr6P24460_001	Banana	cytosol	8.48	27.39
GSMUA_Achr7P03070_001	Banana	mitochondrion	28.01	27.2
GSMUA_Achr3P26130_001	Banana	mitochondrion	19.33	20.68

Protein Annotations

EnsemblPlants:GSMUA_Achr2P17200_001	EnsemblPlants:GSMUA_Achr2T17200_001	EnsemblPlantsGene:GSMUA_Achr2G17200_001	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom_prot	PANTHER:PTHR31060
PANTHER:PTHR31060:SF28	SEG:seg	UniParc:UPI000294B1FA	UniProt:M0S8R1	MapMan:35.1	:

Description

H-BTB5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G17200_001]

Coordinates

chr2:+:17824072..17827327

Molecular Weight (calculated)

56905.6 Da

IEP (calculated)

7.274

GRAVY (calculated)

-0.188

Length

507 amino acids

Sequence
(BLAST)

001: MADFRVGRLE QGQTKIRNVP IAVTPEGFWC CPSPAVLQKS LKNHNHQSKS KASSPLRSRA SSLQRTATST VDKKTHSGSL GSKVVSDDQR CPTSDTAVPA
101: AISVGFGQPE TSDLKVILFG KEGICVRMSV HWNILAENSR FFADKLAGQS PVPCLEVADC EDVEIYVETV GLMYCKELKH KLIKQSVPRV LRIIKVAESL
201: GFRACIKSCL DYLEAVPWVA EEEENVVSSI RHLQNYGASP LLKRVASDLS DPPNDTLAHI MELVLKSNED RGRREMKSLV LKLLKENNIW TNGSVNICIE
301: LFYSSCRSCM ESLLDLFRQA SEPGFSDKSL DSKDPVMRHI ALEADNLLWL VEILADRHAA DEFAVLWAGQ HELAELHSKL PIMSRHLVSC ITARLFVGIG
401: KGEILPPRDT RQLLLQVWLQ PLIGDYSWLQ HGCRSFDRKV VEEGIGQTIL TLPLEDQQSI LLSWLGSFLK VGDNCPNLQR AFEVWWRRTF IRPYVEYQGI
501: NPQSDKS

Best Arabidopsis Sequence Match ( AT3G50780.2 )
(BLAST)

001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE

Arabidopsis Description

BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.