CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra041074.1-P	Field mustard	mitochondrion	96.3	96.3
CDX77940	Canola	mitochondrion	96.3	30.59
CDX77942	Canola	mitochondrion	93.83	27.74
CDX77944	Canola	cytosol	97.53	15.43
KRH08332	Soybean	cytosol	54.32	13.66
AT3G50780.1	Thale cress	cytosol	87.65	13.65
GSMUA_Achr7P08160_001	Banana	cytosol	62.96	13.49
KRH69973	Soybean	cytosol	44.44	13.0
Os12t0596600-01	Rice	cytosol	35.8	12.45
Zm00001d034194_P002	Maize	cytosol	69.14	10.49
Os03t0769400-01	Rice	cytosol	66.67	10.34
KRH76896	Soybean	cytosol	66.67	10.34
HORVU5Hr1G098300.1	Barley	cytosol	66.67	10.32
TraesCS5B01G409500.1	Wheat	cytosol	66.67	10.31
TraesCS5D01G414700.1	Wheat	cytosol	66.67	10.31
VIT_04s0023g01000.t01	Wine grape	cytosol	66.67	10.31
KRH28572	Soybean	cytosol	65.43	10.29
GSMUA_Achr2P17200_001	Banana	cytosol	64.2	10.26
TraesCS5A01G404600.1	Wheat	cytosol	65.43	10.1
KXG37471	Sorghum	cytosol	65.43	10.08
Os07t0123500-01	Rice	cytosol	65.43	10.06
PGSC0003DMT400026018	Potato	cytosol	65.43	9.89
KXG34316	Sorghum	cytosol	65.43	9.76
Solyc02g089950.1.1	Tomato	cytosol	65.43	9.62
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	61.73	9.51
Zm00001d007975_P001	Maize	cytosol	62.96	9.36
OQU85769	Sorghum	mitochondrion	16.05	9.09
TraesCS5A01G060900.1	Wheat	cytosol	58.02	9.02
TraesCS5D01G072400.2	Wheat	cytosol	58.02	8.97
HORVU5Hr1G016360.5	Barley	cytosol	58.02	8.95
TraesCS5B01G071200.2	Wheat	cytosol	58.02	8.94
Zm00001d020128_P001	Maize	mitochondrion	33.33	8.82
Zm00001d030950_P001	Maize	mitochondrion	55.56	8.49
GSMUA_Achr6P34610_001	Banana	cytosol	55.56	8.36
OQU79497	Sorghum	mitochondrion	54.32	7.53
Zm00001d030947_P001	Maize	plastid	48.15	7.07
CDY09229	Canola	plastid	41.98	6.84
KRH08334	Soybean	cytosol	17.28	6.33
KRH69974	Soybean	cytosol	17.28	6.31
CDY08328	Canola	cytosol, plastid	40.74	6.2
CDY38217	Canola	plastid	40.74	6.19
GSMUA_Achr4P28120_001	Banana	cytosol	48.15	5.99
CDX71164	Canola	cytosol	29.63	5.0

Protein Annotations

EnsemblPlants:CDX73793	EnsemblPlantsGene:GSBRNA2T00109414001	InterPro:BTB/POZ_dom_prot	PANTHER:PTHR31060	PANTHER:PTHR31060:SF28	ProteinID:CDX73793
ProteinID:CDX73793.1	UniParc:UPI0004EEA3F8	MapMan:35.1	:	:	:

Description

BnaC08g22100D

Coordinates

chrLK031799:+:2785240..2786217

Molecular Weight (calculated)

9351.2 Da

IEP (calculated)

11.002

GRAVY (calculated)

-0.493

Length

81 amino acids

Sequence
(BLAST)

1: MKQRLMKQSV TRVLRVLNVA ELLGFDQQRI LMSWLGSFLN GGDGCPNLQR AFEVWWRRSF VRPYSDRQGS GVSQTDSTSK E

Best Arabidopsis Sequence Match ( AT3G50780.1 )
(BLAST)

001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE

Arabidopsis Description

BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.