CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020266.1-P	Field mustard	plastid	98.79	99.19
AT5G60050.1	Thale cress	cytosol, plastid	87.73	87.37
VIT_06s0004g03710.t01	Wine grape	plastid	64.59	66.19
KRG88696	Soybean	plastid	60.36	60.73
Solyc11g072900.1.1	Tomato	cytosol	32.39	60.53
KRH24978	Soybean	plastid	59.96	59.24
Solyc11g072720.1.1	Tomato	plastid	59.36	59.24
PGSC0003DMT400065249	Potato	plastid	58.55	58.67
GSMUA_Achr4P30630_001	Banana	cytosol	52.52	50.98
GSMUA_Achr9P28400_001	Banana	cytosol	52.11	50.59
CDX73793	Canola	mitochondrion	6.84	41.98
CDY08328	Canola	cytosol, plastid	42.25	39.47
CDY38217	Canola	plastid	42.05	39.21
CDX77940	Canola	mitochondrion	19.32	37.65
CDX77942	Canola	mitochondrion	19.92	36.13
CDX77944	Canola	cytosol	34.41	33.4
CDX71164	Canola	cytosol	23.94	24.79

Protein Annotations

EnsemblPlants:CDY09229	EnsemblPlantsGene:GSBRNA2T00001482001	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	PANTHER:PTHR31060	PANTHER:PTHR31060:SF12	PFscan:PS50097
ProteinID:CDY09229	ProteinID:CDY09229.1	SEG:seg	SUPFAM:SSF101447	UniParc:UPI0004EEAF84	UniProt:A0A078F865
MapMan:35.1	:	:	:	:	:

Description

BnaA02g06550DBnaA02g06550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F865]

Coordinates

chrLK031993:+:833081..834840

Molecular Weight (calculated)

56571.4 Da

IEP (calculated)

6.213

GRAVY (calculated)

-0.297

Length

497 amino acids

Sequence
(BLAST)

001: MASREVSTMI KHGFIADPSL SFSPSRTTSP AKPSSSSPPP PSPPPPPPPP LNEPTHSNPT LFDMMSEEHH REQPPRRKSH ARVAQIMAEF KNGVVYDAPS
101: DVKLTVVGRD GYRVTMDVHR KVLSEKSRFF MAKMSSRREK GVSHMVEISE CDDVEIYVET VVLMYCDDLK KKLVGENVVK VLALLKVSAA ISFDEGVVSC
201: LEHLEAAPWS GDEEEVVVSC LDELHLPEDS VGLILQRVSS EPTRDRTDDI FLKLLTGVLQ AKDDKARREM KVVIFKLVRE EADHEVSKET LYGLCHRCLT
301: SLVLCLSEVT TQMNDPGKDR GALMGEIARE ADNMLWMVDI LIEKKMCDEF VKLWADQKEL AELHAKIPTM YRHEISKITA QICVGIGRGR ILVNRETRFA
401: VLNTWLEALY EDFGWMRRLS SRSLDRKLVE DGLSQTILTL SLRQQQVILM KWFDRFLSKG DDCPNIQRAF EVWWRRAFIR QVIAEPDASQ LQMTLYD

Best Arabidopsis Sequence Match ( AT5G60050.1 )
(BLAST)

001: MASREVSTMI KQGFIADPSL SFSPSRISSP IKLSTASPPL PPPPPPPPNE STLSNPTLFD MMSDEHNREL PRRKSHARVA QILTEFKNGV VYGHSLGPGD
101: VKLTVVGKDG YRVTMDVHRK VLSEKSRFFM EKMNSRREKG VSHMVEISEC DDLEIYVETV VLMYSDDLKK KLIGENVIKI LALLKVSAAI SFDEGVMSCL
201: EHLEAVPWSE DEEETVVTCL EELHLPDDSV TLILQRVSSQ PSTSSTRTRT DDIFSKLLTG VLQAKDDKAR REMKVLIFKL VREEADYDVS RDTLYGLCHR
301: CLTSLVLCLS EVTTQMNDPG KDRGALMGEI AREADNMLWM VDILIEKKLC SEFVKLWADQ KELANLHSKI PTMYRHEISK ITAQICVGIG KGRILVNRET
401: RFAVLNTWLE ALYDDFGWMR RLSSRSLDRK LVEDGLSQTI LTLSLRQQQV ILMKWFDRFL SKGDDCPNVQ RAFEVWWRRA FIRQVLTEPD EPRLQITLY

Arabidopsis Description

BTB/POZ domain-containing protein At5g60050 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVG9]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.