Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09229 | Canola | plastid | 99.19 | 98.79 |
| AT5G60050.1 | Thale cress | cytosol, plastid | 88.28 | 87.58 |
| VIT_06s0004g03710.t01 | Wine grape | plastid | 64.44 | 65.77 |
| KRG88696 | Soybean | plastid | 60.2 | 60.32 |
| Solyc11g072900.1.1 | Tomato | cytosol | 32.12 | 59.77 |
| KRH24978 | Soybean | plastid | 59.8 | 58.85 |
| Solyc11g072720.1.1 | Tomato | plastid | 59.19 | 58.84 |
| PGSC0003DMT400065249 | Potato | plastid | 58.38 | 58.27 |
| GSMUA_Achr4P30630_001 | Banana | cytosol | 52.32 | 50.59 |
| GSMUA_Achr9P28400_001 | Banana | cytosol | 51.92 | 50.2 |
| Bra041065.1-P | Field mustard | cytosol | 19.39 | 43.44 |
| Bra041074.1-P | Field mustard | mitochondrion | 6.87 | 41.98 |
| Bra027781.1-P | Field mustard | plastid | 42.22 | 39.14 |
Protein Annotations
| EnsemblPlants:Bra020266.1 | EnsemblPlants:Bra020266.1-P | EnsemblPlantsGene:Bra020266 | Gene3D:3.30.710.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:BTB/POZ_dom | InterPro:BTB/POZ_dom_prot | InterPro:IPR000210 | PANTHER:PTHR31060 | PANTHER:PTHR31060:SF12 |
| PFscan:PS50097 | SEG:seg | UniParc:UPI0002543595 | UniProt:M4DUS3 | MapMan:35.1 | : |
Description
AT5G60050 (E=6e-227) | PRLI-interacting factor-related
Coordinates
chrA02:+:5933528..5935015
Molecular Weight (calculated)
56355.1 Da
IEP (calculated)
6.213
GRAVY (calculated)
-0.284
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MASREVSTMI KHGFIADPSL SFSPSRTTTS PAKLSSSSPP PPSPPPPPLN EPTHSNPTLF DMMSEEHHRE QPPRRKSHAR VAQIMAEFKN GVVYDAPSDV
101: KLTVVGRDGY RVTMDVHRKV LSEKSRFFMA KMSSRREKGV SHMVEISECD DVEIYVETVV LMYCDDLKKK LVGENVVKVL ALLKVSAAIS FDEGVVSCLE
201: HLEAAPWSGD EEEVVVSCLD ELHLPEDSVG LILQRVSSEP TRDRTDDIFL KLLTGVLQAK DDKARREMKV VIFKLVREEA DHEVSKETLY GLCHRCLTSL
301: VLCLSEVTTQ MNDPGKDRGA LMGEIAREAD NMLWMVDILI EKKMCDEFAK LWADQKELAE LHAKIPTMYR HEISKITAQI CVGIGRGRIL VNRETRFAVL
401: NTWLEALYED FGWMRRLSSR SLDRKLVEDG LSQTILTLSL RQQQVILMKW FDRFLSKGDD CPNVQRAFEV WWRRAFIRQV IAEPDASQLQ MTLYD
101: KLTVVGRDGY RVTMDVHRKV LSEKSRFFMA KMSSRREKGV SHMVEISECD DVEIYVETVV LMYCDDLKKK LVGENVVKVL ALLKVSAAIS FDEGVVSCLE
201: HLEAAPWSGD EEEVVVSCLD ELHLPEDSVG LILQRVSSEP TRDRTDDIFL KLLTGVLQAK DDKARREMKV VIFKLVREEA DHEVSKETLY GLCHRCLTSL
301: VLCLSEVTTQ MNDPGKDRGA LMGEIAREAD NMLWMVDILI EKKMCDEFAK LWADQKELAE LHAKIPTMYR HEISKITAQI CVGIGRGRIL VNRETRFAVL
401: NTWLEALYED FGWMRRLSSR SLDRKLVEDG LSQTILTLSL RQQQVILMKW FDRFLSKGDD CPNVQRAFEV WWRRAFIRQV IAEPDASQLQ MTLYD
001: MASREVSTMI KQGFIADPSL SFSPSRISSP IKLSTASPPL PPPPPPPPNE STLSNPTLFD MMSDEHNREL PRRKSHARVA QILTEFKNGV VYGHSLGPGD
101: VKLTVVGKDG YRVTMDVHRK VLSEKSRFFM EKMNSRREKG VSHMVEISEC DDLEIYVETV VLMYSDDLKK KLIGENVIKI LALLKVSAAI SFDEGVMSCL
201: EHLEAVPWSE DEEETVVTCL EELHLPDDSV TLILQRVSSQ PSTSSTRTRT DDIFSKLLTG VLQAKDDKAR REMKVLIFKL VREEADYDVS RDTLYGLCHR
301: CLTSLVLCLS EVTTQMNDPG KDRGALMGEI AREADNMLWM VDILIEKKLC SEFVKLWADQ KELANLHSKI PTMYRHEISK ITAQICVGIG KGRILVNRET
401: RFAVLNTWLE ALYDDFGWMR RLSSRSLDRK LVEDGLSQTI LTLSLRQQQV ILMKWFDRFL SKGDDCPNVQ RAFEVWWRRA FIRQVLTEPD EPRLQITLY
101: VKLTVVGKDG YRVTMDVHRK VLSEKSRFFM EKMNSRREKG VSHMVEISEC DDLEIYVETV VLMYSDDLKK KLIGENVIKI LALLKVSAAI SFDEGVMSCL
201: EHLEAVPWSE DEEETVVTCL EELHLPDDSV TLILQRVSSQ PSTSSTRTRT DDIFSKLLTG VLQAKDDKAR REMKVLIFKL VREEADYDVS RDTLYGLCHR
301: CLTSLVLCLS EVTTQMNDPG KDRGALMGEI AREADNMLWM VDILIEKKLC SEFVKLWADQ KELANLHSKI PTMYRHEISK ITAQICVGIG KGRILVNRET
401: RFAVLNTWLE ALYDDFGWMR RLSSRSLDRK LVEDGLSQTI LTLSLRQQQV ILMKWFDRFL SKGDDCPNVQ RAFEVWWRRA FIRQVLTEPD EPRLQITLY
Arabidopsis Description
BTB/POZ domain-containing protein At5g60050 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVG9]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.