Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065249 | Potato | plastid | 97.79 | 98.19 |
| Solyc11g072900.1.1 | Tomato | cytosol | 48.19 | 90.23 |
| VIT_06s0004g03710.t01 | Wine grape | plastid | 68.47 | 70.31 |
| KRG88696 | Soybean | plastid | 61.65 | 62.15 |
| KRH24978 | Soybean | plastid | 60.64 | 60.04 |
| CDY09229 | Canola | plastid | 59.24 | 59.36 |
| Bra020266.1-P | Field mustard | plastid | 58.84 | 59.19 |
| AT5G60050.1 | Thale cress | cytosol, plastid | 58.23 | 58.12 |
| GSMUA_Achr4P30630_001 | Banana | cytosol | 56.43 | 54.88 |
| GSMUA_Achr9P28400_001 | Banana | cytosol | 55.02 | 53.52 |
| Solyc08g081380.2.1 | Tomato | plastid | 46.79 | 36.52 |
| Solyc02g089950.1.1 | Tomato | cytosol | 36.35 | 32.85 |
| Solyc11g005950.1.1 | Tomato | cytosol, plastid | 27.11 | 24.82 |
| Solyc01g109600.2.1 | Tomato | cytosol | 7.23 | 23.23 |
Protein Annotations
| EnsemblPlants:Solyc11g072720.1.1 | EnsemblPlantsGene:Solyc11g072720.1 | Gene3D:3.30.710.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:BTB/POZ_dom | InterPro:BTB/POZ_dom_prot | InterPro:IPR000210 | PANTHER:PTHR31060 | PANTHER:PTHR31060:SF12 | PFscan:PS50097 |
| SEG:seg | UniParc:UPI0002769E40 | UniProt:K4DAX9 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr11:+:55920687..55923050
Molecular Weight (calculated)
56710.0 Da
IEP (calculated)
6.847
GRAVY (calculated)
-0.371
Length
498 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPSNNKSK NQLVSTMIKQ GFISNPYLSP SPSPSPPRTS NPPSPIQIPT RPSNSSPTLF EMMSEEQTRE SKHSLESRYR TQERVSRVLA DAPFPAVGDV
101: RLTIGARDGF KVSMDVHRRV LVGRSRFFAE KLQRNGSHSV EILDCDDVEV YVETLVLMYC DDLKKRLMGE NVNKVLGLLK ISSAIMFDDG VLACLEYLEA
201: VPWSQQEEEK VVSHLSQLQL PDSAAGILQR LVAEPSTSSR SDDILQRLLT GVLHAKDDKA RKEMKKVISR LLRENTSNSS SHESNLDISR DTLYHFCHRC
301: LTSLILSLSE ATSVDDNRQQ DRGVLMGEIA READNLQWLV DILIDRKMGD EFVKLWAEQK ELSILHSKIP TMYRHEISKI TAQLCIAIGR GNLLVPKDVR
401: YCLLSTWLES LYDDFGWMKR AGRSIDKKLV EEGLGQTILT LPLAQQQTIL LNWFDRFLNK GDDCPNIQRA FEVWWRRSFV KQYTVDSQLQ LAIFDYTE
101: RLTIGARDGF KVSMDVHRRV LVGRSRFFAE KLQRNGSHSV EILDCDDVEV YVETLVLMYC DDLKKRLMGE NVNKVLGLLK ISSAIMFDDG VLACLEYLEA
201: VPWSQQEEEK VVSHLSQLQL PDSAAGILQR LVAEPSTSSR SDDILQRLLT GVLHAKDDKA RKEMKKVISR LLRENTSNSS SHESNLDISR DTLYHFCHRC
301: LTSLILSLSE ATSVDDNRQQ DRGVLMGEIA READNLQWLV DILIDRKMGD EFVKLWAEQK ELSILHSKIP TMYRHEISKI TAQLCIAIGR GNLLVPKDVR
401: YCLLSTWLES LYDDFGWMKR AGRSIDKKLV EEGLGQTILT LPLAQQQTIL LNWFDRFLNK GDDCPNIQRA FEVWWRRSFV KQYTVDSQLQ LAIFDYTE
001: MASREVSTMI KQGFIADPSL SFSPSRISSP IKLSTASPPL PPPPPPPPNE STLSNPTLFD MMSDEHNREL PRRKSHARVA QILTEFKNGV VYGHSLGPGD
101: VKLTVVGKDG YRVTMDVHRK VLSEKSRFFM EKMNSRREKG VSHMVEISEC DDLEIYVETV VLMYSDDLKK KLIGENVIKI LALLKVSAAI SFDEGVMSCL
201: EHLEAVPWSE DEEETVVTCL EELHLPDDSV TLILQRVSSQ PSTSSTRTRT DDIFSKLLTG VLQAKDDKAR REMKVLIFKL VREEADYDVS RDTLYGLCHR
301: CLTSLVLCLS EVTTQMNDPG KDRGALMGEI AREADNMLWM VDILIEKKLC SEFVKLWADQ KELANLHSKI PTMYRHEISK ITAQICVGIG KGRILVNRET
401: RFAVLNTWLE ALYDDFGWMR RLSSRSLDRK LVEDGLSQTI LTLSLRQQQV ILMKWFDRFL SKGDDCPNVQ RAFEVWWRRA FIRQVLTEPD EPRLQITLY
101: VKLTVVGKDG YRVTMDVHRK VLSEKSRFFM EKMNSRREKG VSHMVEISEC DDLEIYVETV VLMYSDDLKK KLIGENVIKI LALLKVSAAI SFDEGVMSCL
201: EHLEAVPWSE DEEETVVTCL EELHLPDDSV TLILQRVSSQ PSTSSTRTRT DDIFSKLLTG VLQAKDDKAR REMKVLIFKL VREEADYDVS RDTLYGLCHR
301: CLTSLVLCLS EVTTQMNDPG KDRGALMGEI AREADNMLWM VDILIEKKLC SEFVKLWADQ KELANLHSKI PTMYRHEISK ITAQICVGIG KGRILVNRET
401: RFAVLNTWLE ALYDDFGWMR RLSSRSLDRK LVEDGLSQTI LTLSLRQQQV ILMKWFDRFL SKGDDCPNVQ RAFEVWWRRA FIRQVLTEPD EPRLQITLY
Arabidopsis Description
BTB/POZ domain-containing protein At5g60050 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVG9]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.