CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034194_P002	Maize	cytosol	92.97	91.57
Os03t0769400-01	Rice	cytosol	84.79	85.44
TraesCS5B01G409500.1	Wheat	cytosol	83.08	83.4
TraesCS5A01G404600.1	Wheat	cytosol	82.89	83.05
TraesCS5D01G414700.1	Wheat	cytosol	82.7	83.02
HORVU5Hr1G098300.1	Barley	cytosol	82.51	82.98
KXG34316	Sorghum	cytosol	73.95	71.64
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	67.11	67.11
KRH08332	Soybean	cytosol	40.68	66.46
KRH69973	Soybean	cytosol	34.98	66.43
CDX73793	Canola	mitochondrion	10.08	65.43
VIT_04s0023g01000.t01	Wine grape	cytosol	64.07	64.31
Bra041074.1-P	Field mustard	mitochondrion	9.89	64.2
CDX77940	Canola	mitochondrion	30.8	63.53
Bra041065.1-P	Field mustard	cytosol	26.62	63.35
CDX77942	Canola	mitochondrion	32.13	61.68
PGSC0003DMT400026018	Potato	cytosol	61.41	60.26
GSMUA_Achr6P34610_001	Banana	cytosol	60.08	58.74
KRH28572	Soybean	cytosol	57.22	58.45
KRH76896	Soybean	cytosol	57.98	58.43
Solyc02g089950.1.1	Tomato	cytosol	60.65	57.89
AT3G50780.1	Thale cress	cytosol	55.89	56.54
CDX77944	Canola	cytosol	54.56	56.05
OQU85769	Sorghum	mitochondrion	14.07	51.75
OQU79497	Sorghum	mitochondrion	53.04	47.77
KRH08334	Soybean	cytosol	19.58	46.61
KRH69974	Soybean	cytosol	19.2	45.5
KXG26972	Sorghum	plastid	36.31	31.47
OQU90655	Sorghum	mitochondrion	27.76	27.7
KXG34836	Sorghum	mitochondrion, plastid	29.28	26.32
EES15778	Sorghum	plastid	24.14	24.52
EER93543	Sorghum	mitochondrion	19.58	21.55

Protein Annotations

EnsemblPlants:KXG37471	EnsemblPlantsGene:SORBI_3001G076400	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR31060	PANTHER:PTHR31060:SF28
PFscan:PS50097	ProteinID:KXG37471	ProteinID:KXG37471.1	ProteinID:KXG37472.1	ProteinID:KXG37473.1	SEG:seg
SUPFAM:SSF54695	UniParc:UPI0001C80D93	UniProt:A0A1B6QHS6	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr1:-:5872270..5875944

Molecular Weight (calculated)

58755.5 Da

IEP (calculated)

8.075

GRAVY (calculated)

-0.280

Length

526 amino acids

Sequence
(BLAST)

001: MAESKVVSVD ARTTKIRNVP IAVTPEGFWC CPSQAVLQKT AKNQNQQAKA KTKGGASPLA SKASSIQRAP TISSERRTHS TPTRAKINSE EQRCLLAEDA
101: ATNPPKAVNE RPQKQHKISV GFGQLEMSDL KVVLYGKDGV AVKMSVHKNI LAENSTFFAD KLSRQSPVSS IEVADCEDVE IYVETVGLMY CSDVKQRLIK
201: QTVPRALRIL KVAELLGFPA CVMSCLDYLE AVPWVGEEEE NVVSSVRNLQ SENYGVSPVL KRVASDLTTP PNDTFSHIIE LVLRSNEDRG RREMKSLVQK
301: LLKENSTSCI SGSSDLCSET LYRSCRNCLD SLLILFQQAT DSDFAEQALN IKEPVFRQIA LEADNLLWLA EILADRNAAD EFAVIWASQR ELAGLHSKLP
401: VKSRHLVSCV TARLFVAIGK GEMLPSKDTR RLLLDVWLQP LMDDYNWLQH GCRSFDRKVV EEGIGRTILT LPLEDQQTIL LSWLGSFLKV GDSCPNLQKA
501: FEVWWRRTFI RPYAEQQGNR SQSGRS

Best Arabidopsis Sequence Match ( AT3G50780.2 )
(BLAST)

001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE

Arabidopsis Description

BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.