Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra041065.1-P | Field mustard | cytosol | 38.65 | 90.95 |
| CDX73793 | Canola | mitochondrion | 13.65 | 87.65 |
| CDX77940 | Canola | mitochondrion | 42.69 | 87.06 |
| CDX77944 | Canola | cytosol | 85.19 | 86.52 |
| Bra041074.1-P | Field mustard | mitochondrion | 13.46 | 86.42 |
| CDX77942 | Canola | mitochondrion | 43.85 | 83.21 |
| KRH08332 | Soybean | cytosol | 42.12 | 68.01 |
| KRH69973 | Soybean | cytosol | 35.58 | 66.79 |
| VIT_04s0023g01000.t01 | Wine grape | cytosol | 67.12 | 66.6 |
| KRH76896 | Soybean | cytosol | 63.65 | 63.41 |
| PGSC0003DMT400026018 | Potato | cytosol | 64.62 | 62.69 |
| KRH28572 | Soybean | cytosol | 61.73 | 62.33 |
| GSMUA_Achr7P08160_001 | Banana | cytosol | 44.62 | 61.38 |
| Solyc02g089950.1.1 | Tomato | cytosol | 63.65 | 60.07 |
| GSMUA_Achr2P17200_001 | Banana | cytosol | 55.96 | 57.4 |
| Os12t0596600-01 | Rice | cytosol | 25.38 | 56.65 |
| KXG37471 | Sorghum | cytosol | 56.54 | 55.89 |
| GSMUA_Achr9P26390_001 | Banana | cytosol, nucleus, peroxisome | 55.96 | 55.32 |
| Zm00001d034194_P002 | Maize | cytosol | 56.73 | 55.24 |
| KRH08334 | Soybean | cytosol | 23.27 | 54.75 |
| Os03t0769400-01 | Rice | cytosol | 54.81 | 54.6 |
| TraesCS5D01G414700.1 | Wheat | cytosol | 55.0 | 54.58 |
| TraesCS5B01G409500.1 | Wheat | cytosol | 54.81 | 54.39 |
| KRH69974 | Soybean | cytosol | 23.08 | 54.05 |
| HORVU5Hr1G098300.1 | Barley | cytosol | 54.23 | 53.92 |
| Os07t0123500-01 | Rice | cytosol | 54.42 | 53.7 |
| TraesCS5A01G404600.1 | Wheat | cytosol | 54.04 | 53.52 |
| KXG34316 | Sorghum | cytosol | 53.27 | 51.01 |
| GSMUA_Achr6P34610_001 | Banana | cytosol | 51.35 | 49.63 |
| TraesCS5A01G060900.1 | Wheat | cytosol | 49.62 | 49.52 |
| HORVU5Hr1G016360.5 | Barley | cytosol | 49.62 | 49.14 |
| TraesCS5B01G071200.2 | Wheat | cytosol | 49.42 | 48.86 |
| TraesCS5D01G072400.2 | Wheat | cytosol | 49.23 | 48.85 |
| Zm00001d007975_P001 | Maize | cytosol | 50.77 | 48.44 |
| Zm00001d030950_P001 | Maize | mitochondrion | 45.0 | 44.15 |
| OQU85769 | Sorghum | mitochondrion | 12.12 | 44.06 |
| Zm00001d030947_P001 | Maize | plastid | 44.04 | 41.49 |
| GSMUA_Achr4P28120_001 | Banana | cytosol | 50.58 | 40.4 |
| OQU79497 | Sorghum | mitochondrion | 43.85 | 39.04 |
| Zm00001d020128_P001 | Maize | mitochondrion | 21.54 | 36.6 |
| AT5G60050.1 | Thale cress | cytosol, plastid | 33.08 | 34.47 |
| AT1G63850.1 | Thale cress | cytosol | 34.42 | 32.66 |
| AT2G13690.1 | Thale cress | cytosol, plastid | 26.15 | 25.0 |
Protein Annotations
| MapMan:35.1 | EntrezGene:824242 | ProteinID:AEE78709.1 | ProteinID:ANM64756.1 | ArrayExpress:AT3G50780 | EnsemblPlantsGene:AT3G50780 |
| RefSeq:AT3G50780 | TAIR:AT3G50780 | RefSeq:AT3G50780-TAIR-G | EnsemblPlants:AT3G50780.1 | TAIR:AT3G50780.1 | Unigene:At.35455 |
| EMBL:BT002970 | EMBL:BT005113 | InterPro:BTB/POZ_dom_prot | ProteinID:CAB42907.1 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | RefSeq:NP_001326763.1 | RefSeq:NP_190647.1 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR31060 | PANTHER:PTHR31060:SF5 | UniProt:Q9SVM0 | UniParc:UPI000000BE67 | SEG:seg | : |
Description
BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
Coordinates
chr3:-:18875399..18877744
Molecular Weight (calculated)
58484.3 Da
IEP (calculated)
7.774
GRAVY (calculated)
-0.323
Length
520 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.