Factsheet for TraesCS5D01G414700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G404600.1	Wheat	cytosol	97.14	96.95
TraesCS5B01G409500.1	Wheat	cytosol	96.56	96.56
HORVU5Hr1G098300.1	Barley	cytosol	94.66	94.84
Os03t0769400-01	Rice	cytosol	85.31	85.63
KXG37471	Sorghum	cytosol	83.02	82.7
Zm00001d034194_P002	Maize	cytosol	79.77	78.28
CDX73793	Canola	mitochondrion	10.31	66.67
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	66.6	66.35
Bra041074.1-P	Field mustard	mitochondrion	10.11	65.43
Bra041065.1-P	Field mustard	cytosol	27.29	64.71
KRH08332	Soybean	cytosol	38.55	62.73
KRH69973	Soybean	cytosol	33.02	62.45
VIT_04s0023g01000.t01	Wine grape	cytosol	62.21	62.21
CDX77940	Canola	mitochondrion	29.96	61.57
CDX77942	Canola	mitochondrion	31.3	59.85
PGSC0003DMT400026018	Potato	cytosol	58.78	57.46
GSMUA_Achr6P34610_001	Banana	cytosol	58.59	57.06
KRH28572	Soybean	cytosol	54.96	55.92
KRH76896	Soybean	cytosol	55.53	55.75
TraesCS5D01G072400.2	Wheat	cytosol	55.73	55.73
Solyc02g089950.1.1	Tomato	cytosol	58.59	55.72
CDX77944	Canola	cytosol	54.39	55.66
AT3G50780.1	Thale cress	cytosol	54.58	55.0
KRH08334	Soybean	cytosol	18.51	43.89
KRH69974	Soybean	cytosol	18.32	43.24
TraesCS4D01G054600.1	Wheat	mitochondrion	20.61	22.78

Protein Annotations

EnsemblPlants:TraesCS5D01G414700.1	EnsemblPlantsGene:TraesCS5D01G414700	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR31060	PANTHER:PTHR31060:SF28
PFscan:PS50097	SEG:seg	SUPFAM:SSF54695	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5D:+:477029452..477031722

Molecular Weight (calculated)

58548.0 Da

IEP (calculated)

7.901

GRAVY (calculated)

-0.306

Length

524 amino acids

Sequence
(BLAST)

001: MAEFKVGSLD ARATKFRTVP IAVTPEGFWC CPSQTVLQKT VKNQNQQARP KVGASPPASK ASSLQRALTI SSERRTHSTP TRSRANSDEQ RCPSADNATS
101: NPPKVASERP PKQHKISVGF GQIEMSDLRV VLYGKDGVAV KMSVHKNILA ENSTFFSDKL ARQSPVSSIE VPDCEDVEIY VETVGLMYCN DVKQRLIKKS
201: VPRVLRILKV AELLGFRACV LSCLNYLEAV PWAGEEEENV VSSVRHLQTE DYGVTPILKR VCSDLTSPPN DTFVRIIELV LKSSDDRGRR EMKSLVLKLL
301: KENNSSCASS SADLCVETLY SYCQNCLESL LTLFQQASDS DFSEQSSELK EPVLRQITLE ADNLLWLTDI LAGRNAAEEF AGLWSNQREL AGLHSKLPTK
401: SRHLVSCVTA RLFVAIGKGE MLPSKDTRQL LLDVWLQPLM DDYNWLQHGC RSFDRTVVEE GIGSTILTLP LEDQQTILLS WLGSFLKVGN SCPNLQKAFE
501: VWWRRTFVRP YVEQQGSRSQ SGRS

Best Arabidopsis Sequence Match ( AT3G50780.2 )
(BLAST)

001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE

Arabidopsis Description

BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.