CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79497	Sorghum	mitochondrion	91.61	22.43
KRH08334	Soybean	cytosol	30.07	19.46
KRH69974	Soybean	cytosol	30.07	19.37
HORVU5Hr1G016360.5	Barley	cytosol	67.13	18.29
TraesCS5B01G071200.2	Wheat	cytosol	65.73	17.87
TraesCS5D01G072400.2	Wheat	cytosol	65.03	17.75
GSMUA_Achr7P08160_001	Banana	cytosol	46.85	17.72
TraesCS5A01G060900.1	Wheat	cytosol	64.34	17.66
Zm00001d030950_P001	Maize	mitochondrion	63.64	17.17
Zm00001d030947_P001	Maize	plastid	63.64	16.49
Bra041074.1-P	Field mustard	mitochondrion	9.09	16.05
CDX73793	Canola	mitochondrion	9.09	16.05
GSMUA_Achr2P17200_001	Banana	cytosol	55.24	15.58
KXG37471	Sorghum	cytosol	51.75	14.07
KXG34316	Sorghum	cytosol	51.75	13.63
VIT_04s0023g01000.t01	Wine grape	cytosol	48.25	13.17
CDX77944	Canola	cytosol	46.85	13.09
PGSC0003DMT400026018	Potato	cytosol	48.25	12.87
Solyc02g089950.1.1	Tomato	cytosol	48.25	12.52
KRH76896	Soybean	cytosol	44.76	12.26
AT3G50780.1	Thale cress	cytosol	44.06	12.12
KRH28572	Soybean	cytosol	43.36	12.04
GSMUA_Achr4P28120_001	Banana	cytosol	51.05	11.21
CDX77940	Canola	mitochondrion	18.88	10.59
CDX77942	Canola	mitochondrion	19.58	10.22
KXG26972	Sorghum	plastid	36.36	8.57
KRH08332	Soybean	cytosol	16.78	7.45
OQU90655	Sorghum	mitochondrion	25.87	7.02
EES15778	Sorghum	plastid	21.68	5.98
EER93543	Sorghum	mitochondrion	18.88	5.65
KXG34836	Sorghum	mitochondrion, plastid	21.68	5.3
Os12t0596600-01	Rice	cytosol	0.0	0.0
KRH69973	Soybean	cytosol	0.0	0.0
Bra041065.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:OQU85769	EnsemblPlantsGene:SORBI_3004G304475	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom_prot	PANTHER:PTHR31060	PANTHER:PTHR31060:SF5
ProteinID:OQU85769	ProteinID:OQU85769.1	SEG:seg	UniParc:UPI000B426026	UniProt:A0A1Z5RQC7	MapMan:35.1

Description

hypothetical protein

Coordinates

chr4:+:64337224..64338184

Molecular Weight (calculated)

15697.8 Da

IEP (calculated)

5.575

GRAVY (calculated)

0.027

Length

143 amino acids

Sequence
(BLAST)

001: MLYGKEGIAV RMSVHSDILS QSSAFFAHRL SAAAAAVGGS APNQPCVVEI HDCDDAEMYV ETVGLMYCDE AKHRLLLKQE SVPRVLRIIK AADVLGFRAC
101: VTSCLHYLEA VLWVGDEEER SVVSSIRCLQ SKDRDKDGGC CNY

Best Arabidopsis Sequence Match ( AT3G50780.1 )
(BLAST)

001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE

Arabidopsis Description

BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.