Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0596600-01 | Rice | cytosol | 41.27 | 66.95 |
| KRH69973 | Soybean | cytosol | 48.15 | 65.7 |
| KRH08332 | Soybean | cytosol | 55.56 | 65.22 |
| GSMUA_Achr2P17200_001 | Banana | cytosol | 84.66 | 63.12 |
| CDX73793 | Canola | mitochondrion | 13.49 | 62.96 |
| Bra041065.1-P | Field mustard | cytosol | 36.51 | 62.44 |
| Bra041074.1-P | Field mustard | mitochondrion | 13.23 | 61.73 |
| CDX77940 | Canola | mitochondrion | 39.95 | 59.22 |
| CDX77942 | Canola | mitochondrion | 40.74 | 56.2 |
| GSMUA_Achr9P26390_001 | Banana | cytosol, nucleus, peroxisome | 76.45 | 54.94 |
| VIT_04s0023g01000.t01 | Wine grape | cytosol | 71.96 | 51.91 |
| GSMUA_Achr6P34610_001 | Banana | cytosol | 71.16 | 50.0 |
| PGSC0003DMT400026018 | Potato | cytosol | 70.9 | 50.0 |
| KRH28572 | Soybean | cytosol | 67.99 | 49.9 |
| HORVU5Hr1G016360.5 | Barley | cytosol | 68.78 | 49.52 |
| TraesCS5A01G060900.1 | Wheat | cytosol | 67.99 | 49.33 |
| KRH76896 | Soybean | cytosol | 67.99 | 49.23 |
| TraesCS5B01G071200.2 | Wheat | cytosol | 67.99 | 48.86 |
| TraesCS5D01G072400.2 | Wheat | cytosol | 67.72 | 48.85 |
| Solyc02g089950.1.1 | Tomato | cytosol | 69.84 | 47.91 |
| OQU85769 | Sorghum | mitochondrion | 17.72 | 46.85 |
| AT3G50780.1 | Thale cress | cytosol | 61.38 | 44.62 |
| CDX77944 | Canola | cytosol | 60.32 | 44.53 |
| Zm00001d030950_P001 | Maize | mitochondrion | 59.79 | 42.64 |
| GSMUA_Achr4P28120_001 | Banana | cytosol | 71.43 | 41.47 |
| Zm00001d030947_P001 | Maize | plastid | 57.67 | 39.49 |
| OQU79497 | Sorghum | mitochondrion | 57.67 | 37.33 |
| GSMUA_Achr1P03700_001 | Banana | plastid | 46.03 | 33.4 |
| GSMUA_Achr4P24950_001 | Banana | plastid | 43.39 | 32.41 |
| GSMUA_Achr5P10260_001 | Banana | plastid | 46.3 | 31.76 |
| GSMUA_Achr4P30630_001 | Banana | cytosol | 40.21 | 29.69 |
| GSMUA_Achr9P28400_001 | Banana | cytosol | 39.95 | 29.49 |
| GSMUA_Achr6P24460_001 | Banana | cytosol | 11.11 | 26.75 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 32.54 | 23.79 |
| GSMUA_Achr7P03070_001 | Banana | mitochondrion | 31.48 | 22.8 |
| KRH08334 | Soybean | cytosol | 11.9 | 20.36 |
| KRH69974 | Soybean | cytosol | 11.9 | 20.27 |
| GSMUA_Achr3P26130_001 | Banana | mitochondrion | 21.96 | 17.51 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P08160_001 | EnsemblPlants:GSMUA_Achr7T08160_001 | EnsemblPlantsGene:GSMUA_Achr7G08160_001 | Gene3D:3.30.710.10 | InterPro:BTB/POZ_dom_prot | InterPro:SKP1/BTB/POZ_sf |
| PANTHER:PTHR31060 | PANTHER:PTHR31060:SF28 | SEG:seg | SUPFAM:SSF54695 | UniParc:UPI000295BE7A | UniProt:M0TFQ6 |
| MapMan:35.1 | : | : | : | : | : |
Description
H-BTB5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G08160_001]
Coordinates
chr7:-:6111560..6115634
Molecular Weight (calculated)
43239.3 Da
IEP (calculated)
6.238
GRAVY (calculated)
-0.134
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVHRNILAE HSSFFADKFS RQSPVPCVEI VDCEDVEIYV ETVGLMYCKE PKHRLIKQCV PRVLRILKVA ESLGFHECIK SCLDYLEAVP WVADEEEKVV
101: SSVKHLQSFG ASPILKRVAS DISNPPNDTL AHIMQLVLKS NEDRGRREMK ALVLKLLKEN NVGTNGSVNI RIELFYGSCR TCMESLLHLF RQVSEPGLSD
201: TSIDSKDPVM RQIALEADNL IWLLEILIDR HAADEFATTW ASQHELAELH SKLPIMSRHL VSCITSRLFV GIGRGEMLPS RETRQLLLQI WLQPLIDDYT
301: WLQHGCRSFD RTVVEEGIGQ TILTLPLEDQ QSILLSWLGR FLKVGDNCPN LQRAFEVWWR RTFIRPYAEQ QGTNVMSD
101: SSVKHLQSFG ASPILKRVAS DISNPPNDTL AHIMQLVLKS NEDRGRREMK ALVLKLLKEN NVGTNGSVNI RIELFYGSCR TCMESLLHLF RQVSEPGLSD
201: TSIDSKDPVM RQIALEADNL IWLLEILIDR HAADEFATTW ASQHELAELH SKLPIMSRHL VSCITSRLFV GIGRGEMLPS RETRQLLLQI WLQPLIDDYT
301: WLQHGCRSFD RTVVEEGIGQ TILTLPLEDQ QSILLSWLGR FLKVGDNCPN LQRAFEVWWR RTFIRPYAEQ QGTNVMSD
001: MAEIKNAKVE QRQTKIRNVP VAVTPEGFWC CPSPVAFQKT LKSHNSLTKH KQSSPALQPP KPEKKPSSTT IRSVIASDET QQNLGSFDTV HSIAVPATVQ
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE
101: ERPQRQKVET LPRKVAIEFG EPGSSDAKVI LVGKQGFCVK LSVHKKVLVD HSCFFAKKLA EKDSVFACLE IESCEDAELY VETIGLMYCK DMKQRLMKQN
201: VSRVLRVLKV AELLGFSSCI QSCLDYLEAV PWVGEEEEEK VISSILRLKT EGVGVTPVLK RVASNAVDPP KETLSRIIEL VLRSKEEKSR REMKSIVLKL
301: LREQNGANVA DNFNDTIYSS CQTCLDSVLS LFKQASEGEK PETDTKQIAV EADNLTWLLD VLAERQAAEE FSVTWANQKE LALLHEKLPL MSRYHISRVT
401: SRLFIGIGRG ELLPSKDTRL LLLTTWLQPL FNDYNWLQHG CRSFDGKLVE EGIGRTILTL PLEDQQSILL SWLGSFLNGG DGCPNLQRAF EVWWRRSFIR
501: PYSDRQANGS CQTDSTSKEE
Arabidopsis Description
BTB/POZ domain-containing protein At3g50780 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.