Factsheet for GSMUA_Achr1P03700_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P10260_001	Banana	plastid	88.87	84.03
GSMUA_Achr4P24950_001	Banana	plastid	76.58	78.85
Os04t0579700-01	Rice	cytosol	79.08	77.3
HORVU0Hr1G005290.1	Barley	cytosol	63.72	70.04
KXG26972	Sorghum	plastid	77.54	66.56
Zm00001d026051_P002	Maize	cytosol, mitochondrion, plastid	77.35	66.5
TraesCS2B01G413600.1	Wheat	cytosol, plastid	77.54	65.91
KRH41224	Soybean	mitochondrion	66.99	64.87
HORVU2Hr1G094080.1	Barley	cytosol	77.74	62.69
KRH59948	Soybean	cytosol, plastid	67.37	62.23
CDY08328	Canola	cytosol, plastid	63.15	61.84
Bra027781.1-P	Field mustard	plastid	63.34	61.8
CDY38217	Canola	plastid	62.96	61.54
AT1G63850.1	Thale cress	cytosol	64.3	61.13
Solyc08g081380.2.1	Tomato	plastid	66.79	54.55
PGSC0003DMT400032124	Potato	plastid	66.99	54.36
PGSC0003DMT400012106	Potato	plastid	66.99	54.19
VIT_02s0025g00150.t01	Wine grape	plastid	68.14	53.22
GSMUA_Achr7P08160_001	Banana	cytosol	33.4	46.03
GSMUA_Achr4P30630_001	Banana	cytosol	42.03	42.77
GSMUA_Achr9P28400_001	Banana	cytosol	41.84	42.58
GSMUA_Achr2P17200_001	Banana	cytosol	33.97	34.91
GSMUA_Achr9P26390_001	Banana	cytosol, nucleus, peroxisome	34.74	34.41
GSMUA_Achr6P34610_001	Banana	cytosol	33.59	32.53
GSMUA_Achr7P03070_001	Banana	mitochondrion	31.67	31.61
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	30.52	30.75
GSMUA_Achr4P28120_001	Banana	cytosol	31.67	25.35
GSMUA_Achr6P24460_001	Banana	cytosol	7.1	23.57
GSMUA_Achr3P26130_001	Banana	mitochondrion	21.31	23.42

Protein Annotations

EnsemblPlants:GSMUA_Achr1P03700_001	EnsemblPlants:GSMUA_Achr1T03700_001	EnsemblPlantsGene:GSMUA_Achr1G03700_001	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR31060
PANTHER:PTHR31060:SF3	PFscan:PS50097	SEG:seg	SUPFAM:SSF54695	UniParc:UPI00029526AB	UniProt:M0RWS8
MapMan:35.1	:	:	:	:	:

Description

H-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G03700_001]

Coordinates

chr1:-:3052145..3054257

Molecular Weight (calculated)

57802.0 Da

IEP (calculated)

5.532

GRAVY (calculated)

-0.261

Length

521 amino acids

Sequence
(BLAST)

001: MDASPAASPA ASAAAAFSSP YPPYPSSYSK FNSALNAGLL NPMSPPPPPP LDKTRSSPTL FDMMANEQDY HPRPALLLQE RVAEIIGSCS PGNQLNDAES
101: GDVRLTLTSK DGLTVSLNVH RNILVAHSRF FAAKLSDRWS KQQRSLPHIV EISDCDDVEV YVETLRLMYC KDLRRRLMRE DVSKVLGILK VSASIAFDAG
201: VLSCLEYLEA APWAEDEEEK VASLLSQLHL DSSGAEEVLK RVSLEMATCD AEEPNGGNGG EEILVRLIQV VLEGKDEKAR REMKGLVSKM LRENNTASQC
301: GGMGGGGGAN RGGDLSKESL YSACDGCLRS LRHHFALAAA SDLIEAAQIA RQADNLHWIL DILIDRQIAD DFLRTWACQA ELSEMHPRVP AIHRYEVSRV
401: TARLFVAVGK GQILVSKEAR CLLLRTWLEP FYEDFGWMRR ACKGLDRHLI EDGLANTILT LPLATQQEIL LAWFDRFLNA GDDCPNIQRG FEVWWRRAFW
501: RRNGEPDQQP PGSLYPRIAS L

Best Arabidopsis Sequence Match ( AT1G63850.1 )
(BLAST)

001: MDYSTATTTA GNGYSSPRDS SFPSSFTKFN SALTAGLLNP MSPPPPPAMH DKTRSSPTLF EMMASEADTI GKVPVQIHNG VLPSPSSSSS SSSAAATAAR
101: TTNVNHLVIS AQDKQALAMQ RISDLLVIRS PGNQFNDPNS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAMKLSDRWS KQQLPPSSSP YIVEISDCDD
201: VEVYIETLML MYCRDLRKKM MRHDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE EYRIASLLSE LHLENVGATE VLRRVSVEAS NGNNGSNGGS
301: NDEVLLNLLH IVLEGKDEKA RRDMKTLVSK MLRENSSGND LRKESLYLAC DGCLHKLKRQ FLQAAESDLE NVDQIARQAD NLHWILDILI DRQIAEDFIV
401: MWASLSELSE VHSKVPVVHR FEISRVTARI FVGIGKGQIL TPKEVRCLLL RNWLTPFYDD FGWMRRASKG LDRYLIEDGL SNTILTLPLA WQQEFFLAWF
501: DRFLNSNEDC PNIQRGFEVW WRRAFWRRKE QSQEPARLRV TASATENS

Arabidopsis Description

BTB/POZ domain-containing protein At1g63850 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.